| Genomic Position | scaffold2312:- 21034-21765 |
|---|---|
| See gene structure | |
| CDS Length | 732 |
| Paired RNAseq reads | 72 |
| Single RNAseq reads | 260 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-95) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-112) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGGACCTCCTCACCTCCGACCTCAGGCTCCGCCGAGAGTGTACTGTCTCGGAATGTCAA
TATGGATTTCAGCCAGGATCAGGCACTTTGGACGCCATTTTTGCCATCAGAACTCTGATG
GAGGCATACAGGGAAAAAAGGAGAGCTCTGCATGTCGTATTTCTAGATCTGCAGAAGGCC
TTTGACTGCGTGCCTCGGCAATGTATCTGGTGGGCATTGCGATTCAAAGGGATCCCTGAG
GCCTATATTGACATCATCAGAGACATGTACCACGATTCCGTTTCAATGGTTAGGACTGCT
GTTGGCGATACAAAACCCTTTCCGATCTCAGTAGGGGTTCACCAAGGCTCAGCTCTTAGC
TCATTCTTGTTCAATGTAGTGCTGGACACTGTCTCGGCTAACATCCAGGACCAGCCTCAA
TGGCTGATGATGTATGCCGATGACATAGCGCTCATTGATGAGAGCAGGTTGACGCTGGAG
CGAAAAGTGAACCTCTGGAAGTGTATGCTTGAGTACGGTGGTCTTAAACTAAATGTGACG
AAGACCAAGTACATGGCTTGCGGAAGCCCGGACTCTTACACTATCCATATACACCTGAAC
CAGCCGTTAAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTGCATGAGTCCGGAGGCA
TCGATCACGATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAATGGCGTGAGGTCACAG
GTGTGGTCTTAA
Protein sequence:
MDLLTSDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVVFLDLQKA
FDCVPRQCIWWALRFKGIPEAYIDIIRDMYHDSVSMVRTAVGDTKPFPISVGVHQGSALS
SFLFNVVLDTVSANIQDQPQWLMMYADDIALIDESRLTLERKVNLWKCMLEYGGLKLNVT
KTKYMACGSPDSYTIHIHLNQPLSRKSSGTLDLFCMSPEASITMSKPGSALLGRNGVRSQ
VWS