| New model in OGS2.0 | DPOGS211642 |
|---|---|
| Genomic Position | scaffold1648:+ 11398-13323 |
| See gene structure | |
| CDS Length | 1926 |
| Paired RNAseq reads | 567 |
| Single RNAseq reads | 1234 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011784 (2e-49) |
| Best Drosophila hit | RecQ4 (0.0) |
| Best Human hit | ATP-dependent DNA helicase Q4 (2e-131) |
| Best NR hit (blastp) | rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to rothmund-thomson syndrome DNA helicase recq4 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0004386 helicase activity GO:0003678 DNA helicase activity GO:0006310 DNA recombination GO:0005524 ATP binding GO:0008270 zinc ion binding GO:0008094 DNA-dependent ATPase activity GO:0006281 DNA repair GO:0006260 DNA replication GO:0006302 double-strand break repair GO:0008284 positive regulation of cell proliferation GO:0006284 base-excision repair GO:0048477 oogenesis GO:0045740 positive regulation of DNA replication GO:0010971 positive regulation of G2/M transition of mitotic cell cycle GO:0051301 cell division GO:0002164 larval development GO:0007307 eggshell chorion gene amplification GO:0000739 DNA strand annealing activity GO:0004003 ATP-dependent DNA helicase activity GO:0043138 3'-5' DNA helicase activity |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR004589 DNA helicase, ATP-dependent, RecQ type |
| Orthology group | MCL12633 |
Nucleotide sequence:
ATGCCAGAATTTCTTAAAGCTGGTTGTTTGCACACAAATCAAAGTCCCACTCAGAGAAAA
AAGATTATGGAATTGATAAAAAAAGGTGAAATTAACATACTACTGATATCACCAGAAGCA
CTTATCGCAGGAGACACATCAAGTGGTTTTGCAGGTTTATTCAAGTCCCTACCACAAATT
GCATTTGCATGTATTGATGAAGCTCATTGTGTTTCTCAATGGAGCCATAACTTTAGGCCT
AGTTATTTAATGATTTGTAGGGTGTTAAGGGAAAAATTAAATGTGAAGTGTATCTTAGGA
CTAACAGCTACAGCAAGTCAAGCAACAATTAAAAGTGTCATAAATCATATTAATATTCCT
GATGGTGTTAATGGTGTTCTAACAAATCCCGCACTGCCTGACAATCTTTTCCTATCCATA
TCTTTTGAAAAGGATAAAGACAGAGCACTCGTATCTTTATTGGCTTCCGAAGGAATCAAT
TCATTCAGTTCTATAATTGTTTACTGTATAAGAAGAAATGAATGTGAAAGGATAGCTGCT
GTGATAAGATCGTGTCTTTTCCAGCCTGGTAAGATTAATATGGAAAAAGAAAACAAAAAA
CGAAAGAGAATGTCCTATATCGCGGAAGCGTACCATGCTGGCATGTATGCTGCTCAGAGG
AAGAAAATACAAAAACATTTCATGGATGGTACCTTAAAAATTATAGTTGCGACAGTGGCA
TTTGGCATGGGTATCAACAAATCAGATATTCGTTGTATTATACATTACAATATGCCTCCA
AGTTTTGAGTCCTACGTTCAAGAGGTTGGCAGAGCTGGGAGAGATGGCAAGCCAGCATTT
TGTCATGTTTTCATGAATAACAAAAATGACGATAAAGACGAACTATTGAAACATATTTAC
GCTAACTCAATCGATAGACCTGTTATTAGACGACTTTTGCAGAAAATATTCATACCATGT
AAATGCATTTCTCCAGAAAAAACGGATAATTCAAAAATAACCAATGTATCGAGGTGTCAG
GGTCATGAAGTAGGTATACCGATAGACGAAACTGTAGAAGAATTAGACTTACCATCAGAA
AACATAGCGACTCTATTGTGTTATGTGGAACTTCATCATAAACATTATATAAAAGTTCTG
CACAATGCTTACACAAAGTGTAAGATATCTTCATATGGTGGGCCAATAAAAATTTTAGAA
GCGGCAAAAACCTGCCCACCCCTCGCTATGGCGTATCTAATAGAAAGTAAGAAGGCTGCT
AGTGTAACAAAATTAAATGTCCTAGAATTCAATGTTATAGAGGTAGCAGCGGCTATTGGG
TGGGAAAGTGGTATGACTAAGTATCAGCTGAAAAATCTCGAATGGATAGTAAAAGACGGA
GTATCGAAAAGGTCTCATCTTAAAGTTGAATTCAATACTTTAGGCTTCAGATTAAAATCA
CCTGGTGACCTATCAGCCACAGAACTAGATGAACTTCTAGATGATTTGCATCAGAGTGTA
CATGTACAGGAAAAAAATATGCTGTATCAATTAGAAGAGATACATCAGGCTTTTAACGAA
CTTTGCAATAAGTCATGCGATCAAATAACATTCTCAGAAGAAAACTTGGCACCAAAATCT
AATGAACTGAAATTGATAATAAACGATTACTTCACAAGGGAAAACAACATGCCAGAAAAT
AAACAATTTCAAGAGAGACCGTTAGATACTGAGAGAATCACATCAGATGTCAGAGCTCTT
ATAGCAACATACAAGGACTGTAAGTTCACTGGCCGTAGTATAGCCAGAATTTTCCAGGGT
ATAACATCACCTAATTATCCAGCTCTAGTATGGGGAAGGTGCAAGTTCTGGAGATCACAT
CTTCACGAGGATTTCAATGGGATCATAAGGATTGCTACGCAACAAATTATCAATATGAAA
ATTTAG
Protein sequence:
MPEFLKAGCLHTNQSPTQRKKIMELIKKGEINILLISPEALIAGDTSSGFAGLFKSLPQI
AFACIDEAHCVSQWSHNFRPSYLMICRVLREKLNVKCILGLTATASQATIKSVINHINIP
DGVNGVLTNPALPDNLFLSISFEKDKDRALVSLLASEGINSFSSIIVYCIRRNECERIAA
VIRSCLFQPGKINMEKENKKRKRMSYIAEAYHAGMYAAQRKKIQKHFMDGTLKIIVATVA
FGMGINKSDIRCIIHYNMPPSFESYVQEVGRAGRDGKPAFCHVFMNNKNDDKDELLKHIY
ANSIDRPVIRRLLQKIFIPCKCISPEKTDNSKITNVSRCQGHEVGIPIDETVEELDLPSE
NIATLLCYVELHHKHYIKVLHNAYTKCKISSYGGPIKILEAAKTCPPLAMAYLIESKKAA
SVTKLNVLEFNVIEVAAAIGWESGMTKYQLKNLEWIVKDGVSKRSHLKVEFNTLGFRLKS
PGDLSATELDELLDDLHQSVHVQEKNMLYQLEEIHQAFNELCNKSCDQITFSEENLAPKS
NELKLIINDYFTRENNMPENKQFQERPLDTERITSDVRALIATYKDCKFTGRSIARIFQG
ITSPNYPALVWGRCKFWRSHLHEDFNGIIRIATQQIINMKI