New model in OGS2.0 | DPOGS211646  |
---|---|
Genomic Position | scaffold1648:+ 46141-51929 |
See gene structure | |
CDS Length | 459 |
Paired RNAseq reads   | 124 |
Single RNAseq reads   | 360 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011698 (5e-53) |
Best Drosophila hit   | UK114 (8e-23) |
Best Human hit | ribonuclease UK114 (6e-23) |
Best NR hit (blastp)   | PREDICTED: similar to CG15261 CG15261-PA [Tribolium castaneum] (3e-32) |
Best NR hit (blastx)   | PREDICTED: similar to CG15261 CG15261-PA [Tribolium castaneum] (4e-26) |
GeneOntology terms    | GO:0006449 regulation of translational termination GO:0004519 endonuclease activity GO:0005737 cytoplasm GO:0005739 mitochondrion GO:0016787 hydrolase activity GO:0005634 nucleus |
InterPro families    | IPR019897 YjgF-like protein, conserved site IPR006175 Endoribonuclease L-PSP IPR013813 Endoribonuclease L-PSP/chorismate mutase-like IPR006056 YjgF-like protein |
Orthology group | MCL13050 |
Nucleotide sequence:
ATGTCTAATCCAAATCCTCTTCCTCAGACGAAAGTTACTAAAACTATTGTGACATCTCCT
CATATTTATAAACCCGTAGGACCATACAGTCAAGCTATTCTCGCGGGTAACACGCTATAT
GTATCCGGATTGTTGGGCATGGATAGCCAGGCTCGGCTGGTTTGTGGCGGCGCGGAAGCA
CAGACCAGGCAGGCTCTGGAAAACTTGAAACAAGTGCTGGAAGCTGGAGGATCATCACTT
CTAGCCGTTGTAAAAACTACCGTTCTGTTAGCGAATATGGATGACTTTCAAGTAGTCAAC
CAAGTTTATGCTGAGTATTTCACAAAGGACTGCCCCGCTCGAGCCTCGTACCAAGTCGCC
CGACTGCCTCTGGGGGCATCTGTTGAGATAGAGGTTGTGGCCCTCAGCGGTGACCTCGTC
ATAGCTGAGGCTGGCCCCTGTCCTTGCGCCCGAATTTAA
Protein sequence:
MSNPNPLPQTKVTKTIVTSPHIYKPVGPYSQAILAGNTLYVSGLLGMDSQARLVCGGAEA
QTRQALENLKQVLEAGGSSLLAVVKTTVLLANMDDFQVVNQVYAEYFTKDCPARASYQVA
RLPLGASVEIEVVALSGDLVIAEAGPCPCARI