| New model in OGS2.0 | DPOGS208430 |
|---|---|
| Genomic Position | scaffold371:- 76782-80567 |
| See gene structure | |
| CDS Length | 1581 |
| Paired RNAseq reads | 354 |
| Single RNAseq reads | 908 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009037 (0.0) |
| Best Drosophila hit | argonaute 3, isoform D (2e-141) |
| Best Human hit | piwi-like protein 2 (2e-126) |
| Best NR hit (blastp) | argonaute 3 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | argonaute 3 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0003723 RNA binding GO:0035194 posttranscriptional gene silencing by RNA |
| InterPro families | IPR003165 Stem cell self-renewal protein Piwi IPR003100 Argonaute/Dicer protein, PAZ IPR012337 Ribonuclease H-like |
| Orthology group | MCL10732 |
Nucleotide sequence:
ATGGTTAAAATTACGTATCTTGAGTATTACAAGAATAAAGGTATTGATATTATGGATATG
GACCAGCCAATGTTGATATCGAGAGATTCCAAGCGTATGCCCGGCTCAGAGGAGATTACT
GATTTCATGATATGCCTCGTACCGGAACTGTGCCAACTGACTGGCTTGTCTGACAGTCAG
AGAAGTAACTTCAAACTAATGAAAGATGTCGCCACTTACACCAGAATAACACCGAATCAA
CGGCATGCTGCTTTTAAAAAGTACATCCAAAATGTTCTAGAAAACGAGTCCGCCTTGAAT
CGCCTAAAGGGCTGGGGTCTCACAATAGCCCCTGAGACGGTTGAGATAGCTGGCCGTACT
TTGGCACCAGAGACTTTATATTTTGGCAATAACGTCAAGGTACCGGGACAGGCGAATTCC
GAATGGAACGGTGACGTCGGAAGGAACGGTGTGATGCAAGCCGTGGATATATTAAGATGG
GTTGTACTGTTCACTGATCGGGATAAACAGGTGGCTTCGGATTTCGTAGAAACTCTAAAG
CGCTGCAGCCGTCCGATGGGTATAAACGTGTCTAACCCGGATATGGTCCGACTCCCAAAC
GATCGGACCGATACTTATGTGATGGCACTCAAGAAATGTATCAGCAGTCAGTTACAAGTG
GTGGTAGCCATCTGTCCTACCATCAGAGACGATAGGTACGCTGCCATCAAGAAGATATGC
TGCGCTGAGAACCCGGTACCATCTCAGGTGATCAACGCACGTACGATAATGAACAATCAG
AAAATAAGATCGGTTACACAGAAGATATTACTGCAAATTAATTGTAAGCTGGGAGGTACC
TTGTGGCATATCAGTATACCGTTCAAATCGGCTATGGTTGTCGGTATAGATTCATACCAT
GACGCCAGCAGGAAGAAACGTAGCGTGTGTGCATTTGTGGCTTCATATAACCAGTCAATG
ACGCACTGGTATTCCAAGGCGGTATTCCAAGAGAGGGGTCAAGAAATAGTGGACAGTCTC
AAATCCTGTTTAGTCGACGCCCTCAAACATTATCTAAGAATAAATGGAAGATTACCCGAT
AGGATTATAATATATAGAGACGGCGTGGGCGATGGTCAGTTGAAACTTCTCAAAGAGTAT
GAGATACCTCAAATGGAAGTAAGTTTTTCGGTTGTCGATGACACCTACAAGCCCACTTTA
ACCTACATCGTCGTACAGAAACGTATTAATACGCGAATATTTTTGAAGTCTAGAGAAGGT
TACAGTAATCCCGCACCAGGAACAATAGTTGATTATAAGATAACTAGACGGGACTGGTAC
GACTTCTTAATAGTATCACAGAAGGTGAACCAGGGTACCGTGACCCCTACTCACTATGTG
GTCGTTAGTGACAACAGTCCAATGTCCCCGGACCAGTGTCAGAGGTTAACATACAAATTG
TGTCATCTGTATTACAATTGGCCCGGCACTGTTCGTGTGCCAGCGCCTTGTCAATACGCA
CACAAGCTGGCATCGCTTGTAGGGCAGAATATACACCAGCAGCCGTCTGAAGCGTTATCT
GATAAGCTATTTTTCTTATAA
Protein sequence:
MVKITYLEYYKNKGIDIMDMDQPMLISRDSKRMPGSEEITDFMICLVPELCQLTGLSDSQ
RSNFKLMKDVATYTRITPNQRHAAFKKYIQNVLENESALNRLKGWGLTIAPETVEIAGRT
LAPETLYFGNNVKVPGQANSEWNGDVGRNGVMQAVDILRWVVLFTDRDKQVASDFVETLK
RCSRPMGINVSNPDMVRLPNDRTDTYVMALKKCISSQLQVVVAICPTIRDDRYAAIKKIC
CAENPVPSQVINARTIMNNQKIRSVTQKILLQINCKLGGTLWHISIPFKSAMVVGIDSYH
DASRKKRSVCAFVASYNQSMTHWYSKAVFQERGQEIVDSLKSCLVDALKHYLRINGRLPD
RIIIYRDGVGDGQLKLLKEYEIPQMEVSFSVVDDTYKPTLTYIVVQKRINTRIFLKSREG
YSNPAPGTIVDYKITRRDWYDFLIVSQKVNQGTVTPTHYVVVSDNSPMSPDQCQRLTYKL
CHLYYNWPGTVRVPAPCQYAHKLASLVGQNIHQQPSEALSDKLFFL