| New model in OGS2.0 | DPOGS207303 |
|---|---|
| Genomic Position | scaffold475:- 21241-27806 |
| See gene structure | |
| CDS Length | 645 |
| Paired RNAseq reads | 16 |
| Single RNAseq reads | 72 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012033 (2e-60) |
| Best Drosophila hit | HLH54F (3e-08) |
| Best Human hit | musculin (2e-20) |
| Best NR hit (blastp) | basic helix-loop-helix type transcription factor HLH54F [Bombyx mori] (4e-69) |
| Best NR hit (blastx) | basic helix-loop-helix type transcription factor HLH54F [Bombyx mori] (1e-68) |
| GeneOntology terms | GO:0006366 transcription from RNA polymerase II promoter GO:0003700 sequence-specific DNA binding transcription factor activity GO:0003714 transcription corepressor activity GO:0005634 nucleus |
| InterPro families | IPR001092 Helix-loop-helix DNA-binding domain IPR011598 Helix-loop-helix DNA-binding |
| Orthology group | MCL16962 |
Nucleotide sequence:
ATGCCTAGGAAACGATTAAATCGATCGAATATCGATAAAAGAGTAGAAGACGGAGATGAT
GATGCCTTCCTATTTGAAGATTCTCTGTCCAGTTCCGGTAGAAGCGGTCACGAGCCCCAA
CATAGGAATGCCGCGAATGCGCGGGAAAGAGCCCGTATGAGAGTATTGTCGAAGGCTTTT
TGCAGGCTAAAGACCACCTTACCCTGGGTACCAGCTGACACTAAGCTCTCCAAGCTGGAC
ACCCTTCGTTTGGCTGCATCTTACATCGCACACCTTCGCGCTCTGCTGCATGAGCCGCGA
TCCGCACACACACCGCCGCATCCGCTCAATCTCGCATGGCCATTTGCATTCCAACATGGT
GGCAGTTTAAGTTGTACGATCTCTCAAAGATGGAGTGTTAACACACAAAACTGCGACTCA
ACTGCCGAGGAAAGAAACCAGATCCAAAGAGAAATACATAATAGCGGAAGATGCAACGAA
AATTATAACCAAGATTATTCTGAAAATGACTACGAAGACAGAAATTACGAAGAAATGACG
AACGATGTCCCTTGCAATAACGTGCAATATTGTGATTACGGTTACAAAGAGAACTATTAT
GAGATGAGGAACTCTTATTCGTCAAACGGATTAATGAATGTGTGA
Protein sequence:
MPRKRLNRSNIDKRVEDGDDDAFLFEDSLSSSGRSGHEPQHRNAANARERARMRVLSKAF
CRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRSAHTPPHPLNLAWPFAFQHG
GSLSCTISQRWSVNTQNCDSTAEERNQIQREIHNSGRCNENYNQDYSENDYEDRNYEEMT
NDVPCNNVQYCDYGYKENYYEMRNSYSSNGLMNV