| New model in OGS2.0 | DPOGS215937 |
|---|---|
| Genomic Position | scaffold899:- 4194-5094 |
| See gene structure | |
| CDS Length | 708 |
| Paired RNAseq reads | 218 |
| Single RNAseq reads | 700 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001867 (1e-68) |
| Best Drosophila hit | CG17985 (1e-17) |
| Best Human hit | lysM and putative peptidoglycan-binding domain-containing protein 3 (2e-12) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL007321 [Aedes aegypti] (1e-23) |
| Best NR hit (blastx) | PREDICTED: similar to CG17985-PA [Apis mellifera] (3e-24) |
| GeneOntology terms | GO:0016998 cell wall macromolecule catabolic process |
| InterPro families | IPR018392 Peptidoglycan-binding lysin domain IPR002482 Peptidoglycan-binding Lysin subgroup |
| Orthology group | MCL12423 |
Nucleotide sequence:
ATGAACGGGTATAAAGACGATAACGAATATAAGAATGAAGTTCAACTGTACAGAATAAAA
CCTCAAGACCACTTTATTGAAGCTCAAGTCCAAGAAGGCGATACGTTACAGGCGATTGCA
TTACGGTTTTATTGTTCTATTTCAGAATTGAAAAGGATTAACAATATTCATAAAGACAAT
GAAATCCATGCAAGAAGAACCATCAAAGTGCCCGTCACTCCTTACTCTGTGCTCACAGAA
CTCATACCAGCACAGCAGACGCCTGAGCCCACGCCATCAACATCTAGCCATATATCCACT
AGTCTAAATATGAATAATCTCCTTCAGGACCCTGTACAGAACAGATTGTTACCCACAAAT
TTGGATACCAGTCCAAAGAAAATAGAATCTAAGGATGGCGACTACTCTATCGATTGTAAC
ACTGTCGTTCTAAACAGTACTCTCACGCCTTTGGTTGTGCCTTATACAGATTCAGAGCAA
AACGAAAGTATCTCGGAAGATACAAAACTTTTACCAAACAAACAAAAAGTGCCAGTTGAA
GCGGTCGTGGTTAAAGAGTTGACTTCGCACGGTGCAGATTTCGGTTTGAAATGGTTTCAT
CTGTTGTGTTTCGTTCTGGTCCTAGGATTTGCCGCCCCTTTAATATATGTCATGTTTTAT
TTGGACAAACCGGAACATTCAGAAGTACCGCCGCTACATCCCACATGA
Protein sequence:
MNGYKDDNEYKNEVQLYRIKPQDHFIEAQVQEGDTLQAIALRFYCSISELKRINNIHKDN
EIHARRTIKVPVTPYSVLTELIPAQQTPEPTPSTSSHISTSLNMNNLLQDPVQNRLLPTN
LDTSPKKIESKDGDYSIDCNTVVLNSTLTPLVVPYTDSEQNESISEDTKLLPNKQKVPVE
AVVVKELTSHGADFGLKWFHLLCFVLVLGFAAPLIYVMFYLDKPEHSEVPPLHPT