| New model in OGS2.0 | DPOGS200156 |
|---|---|
| Genomic Position | scaffold1546:- 1534-26670 |
| See gene structure | |
| CDS Length | 738 |
| Paired RNAseq reads | 51 |
| Single RNAseq reads | 162 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004892 (7e-09) |
| Best Drosophila hit | CG34354, isoform A (4e-90) |
| Best Human hit | nucleolysin TIA-1 isoform p40 isoform 2 (3e-67) |
| Best NR hit (blastp) | PREDICTED: similar to CG12870-PA isoform 1 [Apis mellifera] (5e-103) |
| Best NR hit (blastx) | PREDICTED: similar to CG12870-PA isoform 1 [Apis mellifera] (8e-104) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL12829 |
Nucleotide sequence:
ATGACCACTATGACGAATGCTGGTCCCATACCGGTTGCTGCCGCAACCAAGCTAGAGCCA
AAGCTGCTGCAATTGCCGCACCCAGCACTAATGCCGCAAATACCACAACAGCAACACCAC
CACCAACACCCACACGGGAACAACAATAAACTCGAACACTACCACATCTTCGTCGGTGAT
CTCAGCCCGGAGATTGAGACGCAGAATCTCAGAGACGCCTTCGCCCCATTCGGCGAAATA
TCGGATTGTCGCGTCGTTCGTGATCCTCAGACGCTCAAATCTAAGGGATACGGTTTCGTG
TCCTTCCTTAAGAAATCCGAAGCGGAGTCAGCTATAACGGCTATGAACGGCCAGTGGTTG
GGGTCGAGGTCTATACGAACTAACTGGGCGACAAGGAAACCACCAGCTCCAAAAAACGAA
CTAAACTCAAAGCCGCTAACCTTCGACGAGGTTTACAACCAGAGCTCCCCGACCAATTGC
ACGGTCTACTGCGGCGGTCTTACGGCCGGGCTCACCGAGGAGCTCATGCAGAAGACCTTC
CAGCCCTTCGGGACCATCCAGGAGATACGCGTCTTCAAGGATAAGGGATACGCTTTTATC
AGATTCTCAACCAAAGAGAGCGCGACCCATGCTATAGTTGCTGTGCACAATGCTGATGTT
AACGGCGCTCCTGTGAAGTGTTCCTGGGGCAAGGAATCCGGTGACCCGAATAACGCACAA
GGAGCACAGGTAATATAA
Protein sequence:
MTTMTNAGPIPVAAATKLEPKLLQLPHPALMPQIPQQQHHHQHPHGNNNKLEHYHIFVGD
LSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAMNGQWL
GSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEELMQKTF
QPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNADVNGAPVKCSWGKESGDPNNAQ
GAQVI