| New model in OGS2.0 | DPOGS206458 |
|---|---|
| Genomic Position | scaffold269:- 70372-71084 |
| See gene structure | |
| CDS Length | 417 |
| Paired RNAseq reads | 121 |
| Single RNAseq reads | 281 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005469 (2e-58) |
| Best Drosophila hit | Rpb4, isoform F (6e-47) |
| Best Human hit | DNA-directed RNA polymerase II subunit RPB4 (2e-42) |
| Best NR hit (blastp) | PREDICTED: similar to histone acetyltransferase, putative [Nasonia vitripennis] (1e-61) |
| Best NR hit (blastx) | PREDICTED: similar to histone acetyltransferase, putative [Nasonia vitripennis] (9e-51) |
| GeneOntology terms | GO:0044237 cellular metabolic process GO:0006350 transcription GO:0003824 catalytic activity GO:0000166 nucleotide binding GO:0003899 DNA-directed RNA polymerase activity |
| InterPro families | IPR005574 RNA polymerase II, Rpb4 IPR006590 RNA polymerase II, Rpb4, core IPR010997 HRDC-like |
| Orthology group | MCL10535 |
Nucleotide sequence:
ATGTCTGGACCGCTACAAGACGTGGTAGAAGAAGACGCGGCGGATTTACAATTTCCAAAA
GAATTCGAAAATGCAGAAACTTTATTAATATCCGAAGTCGATATGTTACTAGAGCATAGA
AAAGCACAAAACGAATCCGCAGAGGAGGAACAAGAATTTTCTGAGGTTTTTATGAAAACA
CTCACCTATACAAACATGTTTAAAAAGTTTAAAAACAAAGAGACCATAACAGCTGTAAGA
AACTTATTACAATCTAAAAAACTACATAAGTTTGAAGTAGCCAGTTTAGCAAATTTATGC
CCCGAAACACCCGAAGAAGCTAAAGCTCTTATTCCATCACTTGAAGGGAGGTTTGAAGAC
GAGGAACTCAGAATATTGTTAGATGACATACAAACAAAACGAAGTATCCAATACTAA
Protein sequence:
MSGPLQDVVEEDAADLQFPKEFENAETLLISEVDMLLEHRKAQNESAEEEQEFSEVFMKT
LTYTNMFKKFKNKETITAVRNLLQSKKLHKFEVASLANLCPETPEEAKALIPSLEGRFED
EELRILLDDIQTKRSIQY