| New model in OGS2.0 | DPOGS206459 |
|---|---|
| Genomic Position | scaffold269:- 41999-45523 |
| See gene structure | |
| CDS Length | 3525 |
| Paired RNAseq reads | 2997 |
| Single RNAseq reads | 6874 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005470 (0.0) |
| Best Drosophila hit | suppressor of sable (4e-38) |
| Best Human hit | zinc finger CCCH domain-containing protein 4 (6e-21) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL010074 [Aedes aegypti] (2e-57) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (5e-62) |
| GeneOntology terms | GO:0005634 nucleus GO:0003729 mRNA binding GO:0016564 transcription repressor activity GO:0008270 zinc ion binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000571 Zinc finger, CCCH-type |
| Orthology group | MCL18474 |
Nucleotide sequence:
ATGGCAGATCCAGCTACAGTTACAGAAGATTTAGAAGATGGTGAGATTGAAAGCGATGGG
GAAGAAACAAATGAAACACAAAATGAAGAAAAGCCGGAGGAAGCAGCTGCAGTTGTTGAA
GAAAATAAAGCAAAAGTAGATAGTCAAAGTTTTTATTATTCTAAGTCAGGTAAGAAGAAG
AAGTCAAAATCAAATAAGAGCGAGCAGAAGGTTAAAGATAAAAGTAAAAAGAGTCGGAAG
TATGCGGAAACGATTGAGGATGACTTTGCCGGTGGGATAGAAAAAGCAATAAGAAAGGCT
ATGAACAAAAACGATGGCAACAATTTTCAAGGTGAAGCTGAAGGCGAAGAACGTAGGAAA
TATAAAAAGAGAAAGAAATACGATGGAAAGGAGGGGTCGAGTAAGAAGCGCAAAAAACAG
GAGTATTCCGATGAAATGGATGAAGCGGAAATGATGTGCGTTCGCGGAGCTTCGCCGGTA
CAGAAACAGTCTCAGGATGAAAGCTATCAGGAACAAGACTCGTACGAATCTGATAGCAGC
CAAGATTCACGAGGACACCAGCAGCATCGCCAGCAGAGGCATCGACCACCACAGCGGGAG
AGAAATAAAAATAATAAAAATGATAGGAGGAGGGGGGGAACACATCCCATGCAAGATCCC
GATGGTGTTTGTCTGTATTACATGCAAGGAAAATGTCACAAAGGGGACGATTGTGTGTAC
TCTCACGACGCACAGCCGCCGAGGAAAATGGAACTATGCAAATTTTATTTAATGGAATGT
TGCGCCAAAAGAGATAAGTGTCTGTACATGCACGCTGACTTCCCTTGCAAATACTATCAC
ACTGGGCTTCCATGTATTTATAAAGACGAATGTAAATTTGCGCACGGTAAACCTTTAAGC
GATGCACTCAAAAATATTTTATTGAAACACATCGAATCAGCTCCTAAGGAAATATTAGGT
GACTTCCCAAGACTCAATAGAGATGGAGCGTTAAAAATGTTACAAAATACACAACTCAAA
CTAATGCAACAATATTCAGAGAGCACGGACGCTGAAATAAAGAATATTCCGTCACTCTTC
GATATTAACATACCTAATCCTCAACTAAATGTAGATTCGTCTCAGAATAGTTCTTTTAAC
AACGAAAGGCAGAGCAAGGTATCACCTAAAGTAAGGCAGTCGAGGTGGCAAAATGACGAG
TCGAATCAAAATCAATGTCATTCACCAAACAGCAATGCAAGTTCAAATGTTCTAAGTATT
AAAAACTTAACCGGTGTATTATCGCCTCGACAAATTTATGAACTCACAAAGATAGGTATC
GAAAACTTAGATCAATTGAGTCAGTTAACAGTATTACAGTTGAATAACATCGGTATATCC
TTAAAACAAATCTCTGACATACAACTGAACACAATGAGCATCCAGAAATTAGGTTTAATT
AGCAATACTGAACAACAATCCCCACATCATCAATTCGTTAGTACTAATGTTCCTGCAAAG
GATTTAGATTTAAGAGTACCGCCCGCAGCACTGCCTTCGTCGAATAGTTTAGCTATAGCA
TCCGAATTACCCGGTCAAGACGTTGATATGCGTTTTCAGCCGAACACACAATCACTTAGT
ATCAAAGAAGAGTCGAGCAATAAAACATCTAAAAGAGAAACAAGCAATAAAGACATGATT
GATATAGATCAGTACACAAAAGATGCGTTAAAATTTGCATCAAAAGATAAAGAAAACATA
GACATTTCAAACGAGACTGTAGACACTGAAAAGAATAGTACTTCAAATGAAATAAAAGAT
GTAGATCACAGGGTCATTCCATTTTCTGATGGCGGGTCGAGTAGTCATAATGCTAATATA
GAAGAGAATACTCTGCGTTCGGAGGCGGATACGGACATACGGTTTCTGCAACCGGATCCT
ATATTTAAAAATGCTGAGAAGAAACATCGTCGTTCGACTACGGACGACGATGAAGATAAC
AATTTACTGATCGACGAGAAATGGTATTCAAGTGACGAAGAAAAGGGAAATAAAAAGAAA
TCACCCATATCCTCACCTCAGAAGTCGTTGATGTCACCGCCGCCGGTGGTTCCGCCTGTT
ATAGAACCTTCGTCGGTTTTGAGTAAACTTGGTGATCTATCAAAAATAGATATCAGCGAA
GAAGTTACAAAGCTGCTCAATACTATGAAACATAATTTACACGAAACTCCAAGTCAAGAA
ACTCAAGAGCCGACGATATCAAGAGATCCTCGTTCTAGAAGATCCCCTCCGACGTCTGTG
GACACCAGTGTAGAAACAAGTAAAACGACGAGTAAGAAGACCAATCGAGTGTCTATATAC
GAATGTGTTGACGGTGAACCCACGGATGGGCGTCGAAGAACGGACGTGGATCTCCGGACG
ACGGATTTCAAAGGCCCCAGCTACGGTGACACAGACTTGAGACAAAACACCAGCGGTGAC
ATAGATTTACGTCTAGGCTTACCGTTCAAACCGATACCTAACTACACGCCAGCCTCAGAA
ATAAACGGTTCAATTAACAGTCATCCGCCGATACATTACAAACTAGTTGCCATACACATA
CCGCGTCCTGATTACACGGATATCAAAAATAGCACAGCGAAATCACAAGCACTGACGGAT
CCTAGGTTAAGGAAAGTATTCAGATTGTCCGTAGAAGAAACTAATAGTGACAGTGAAAAA
CCAGCGAAAGTTGTAAATACAGGGCCCCGAGTGGACCCCAGACGGAAACCTAAAGATCAA
ATCGATACCACTAGTCAAGAACAAAAATCTAACTCATTAGAATTACAGACGATATTACAA
AATTCAAATTGGTACAAAGATTTGAGTTCCACACAGAAGATATTCGTGAATCAGAATCTA
GCACCGGTGACGCAGATGATAAAACAACACCATCAGGAAAAGCAAATGGGTAAGAAATTT
GATATAGGTTCAATACAAAACAATAACGTTCTGTGTAGCATATTCACTAATCTAGGCGTG
ACTCTTGGAGAAAACGGTGAGTTCTCGTATTTACCTAAACCGAAGGAGGCTCTGCTGAAG
ACTCCGATAGGCTTTAGTCAGAATTCAAATCCTTTCGGCATGAACAACATGTCCGGAGGC
CATGGGCCTATGGAGGGTAATATTAATATGATCAATATGCCGCCAATGGGCATGGCTGGT
GTAGGAAACATGTCTAATATGAATTCATTGCACGGCTTCAACCAGCCTATGTCGGACCCC
AGAGGTGGGCCGACTCCGGGCCTGCTGGGCATCGCGCCGAACATACCTCATAACTTTAAC
AACAACAAATTCGGTGGTCCACATAATTTCGGTAACATGGGATTCAACGGTCCGCCTAAC
GATTTTAATTTTATGGAGGGAGATCAGAACTTCCAAAGATTTCCCAACAGAGGAGGTCTC
CGCGGCAGAGGGAACAATGATCGCTGGAACAGAGGTGGAAATAGGGGGCATAGGGACAGG
AAAAATTTCAACGAGCGAGGTAATTGGAAAAACGACAGGCATTAG
Protein sequence:
MADPATVTEDLEDGEIESDGEETNETQNEEKPEEAAAVVEENKAKVDSQSFYYSKSGKKK
KSKSNKSEQKVKDKSKKSRKYAETIEDDFAGGIEKAIRKAMNKNDGNNFQGEAEGEERRK
YKKRKKYDGKEGSSKKRKKQEYSDEMDEAEMMCVRGASPVQKQSQDESYQEQDSYESDSS
QDSRGHQQHRQQRHRPPQRERNKNNKNDRRRGGTHPMQDPDGVCLYYMQGKCHKGDDCVY
SHDAQPPRKMELCKFYLMECCAKRDKCLYMHADFPCKYYHTGLPCIYKDECKFAHGKPLS
DALKNILLKHIESAPKEILGDFPRLNRDGALKMLQNTQLKLMQQYSESTDAEIKNIPSLF
DINIPNPQLNVDSSQNSSFNNERQSKVSPKVRQSRWQNDESNQNQCHSPNSNASSNVLSI
KNLTGVLSPRQIYELTKIGIENLDQLSQLTVLQLNNIGISLKQISDIQLNTMSIQKLGLI
SNTEQQSPHHQFVSTNVPAKDLDLRVPPAALPSSNSLAIASELPGQDVDMRFQPNTQSLS
IKEESSNKTSKRETSNKDMIDIDQYTKDALKFASKDKENIDISNETVDTEKNSTSNEIKD
VDHRVIPFSDGGSSSHNANIEENTLRSEADTDIRFLQPDPIFKNAEKKHRRSTTDDDEDN
NLLIDEKWYSSDEEKGNKKKSPISSPQKSLMSPPPVVPPVIEPSSVLSKLGDLSKIDISE
EVTKLLNTMKHNLHETPSQETQEPTISRDPRSRRSPPTSVDTSVETSKTTSKKTNRVSIY
ECVDGEPTDGRRRTDVDLRTTDFKGPSYGDTDLRQNTSGDIDLRLGLPFKPIPNYTPASE
INGSINSHPPIHYKLVAIHIPRPDYTDIKNSTAKSQALTDPRLRKVFRLSVEETNSDSEK
PAKVVNTGPRVDPRRKPKDQIDTTSQEQKSNSLELQTILQNSNWYKDLSSTQKIFVNQNL
APVTQMIKQHHQEKQMGKKFDIGSIQNNNVLCSIFTNLGVTLGENGEFSYLPKPKEALLK
TPIGFSQNSNPFGMNNMSGGHGPMEGNINMINMPPMGMAGVGNMSNMNSLHGFNQPMSDP
RGGPTPGLLGIAPNIPHNFNNNKFGGPHNFGNMGFNGPPNDFNFMEGDQNFQRFPNRGGL
RGRGNNDRWNRGGNRGHRDRKNFNERGNWKNDRH