| New model in OGS2.0 | DPOGS206462 |
|---|---|
| Genomic Position | scaffold269:+ 48329-59090 |
| See gene structure | |
| CDS Length | 3081 |
| Paired RNAseq reads | 2909 |
| Single RNAseq reads | 6830 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005338 (0.0) |
| Best Drosophila hit | CG11070 (0.0) |
| Best Human hit | ubiquitin conjugation factor E4 A (7e-166) |
| Best NR hit (blastp) | PREDICTED: similar to predicted protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to predicted protein [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0034450 ubiquitin-ubiquitin ligase activity GO:0000151 ubiquitin ligase complex GO:0016567 protein ubiquitination GO:0005515 protein binding |
| InterPro families | IPR019474 Ubiquitin conjugation factor E4, core IPR003613 U box domain IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL13373 |
Nucleotide sequence:
ATGTCTGAACCAAATAATCCGTTTGTGGGTCTGCTGGGTGTCGCAGAAGCTAAGTCAACA
GAGGGATCTAATTTTGATTCGACCCAAATATCAATAGACGTACATAATGTACAAGGTGCC
GAACAGCTTCTTGTAATTAACAATATAATTGAGAATGTTTTCTTTTTCACTGTGAACCCT
AATGCTGCGGATAAAAGTTCTGAAAGGCAATTGGTATACCTCGAAGAACTTGCCCAGGCT
ATGAACCCCAGAATACATATTGATTTAGAAGCTCTCGAGCAAGCCCTTTTTGAAAGGCTA
TTACTACAAGATGTAGAGCAGCAAGTTATACCCAAAGGAAGTACAGTATTTAAAGAGCAT
GTTATCCAGAAACAAGTATTTCCATATTTATTTAGCTCGATGGAAAACATCAACAGTTAC
AGTCATATTAACACACCTTATGTCCAAGATGCTTTAAATAGGATGAAGGAATTGATATTC
CGGAATGCAGTCACAGCATTAAAACAGCCTGCCCTTTTTGAGGGTCAGGATTTTGCTGAG
CAACTTGTAGAAATATTACGACAGATTGTTCAACAAAGTCCGACATTTTTCATAGACTTG
GTAAAATCATTTGTAGCTGAAGGAGATCGTGACTGTAAAAAACAGCTGAAAGACACTATG
ATTCCAGTGTTAAGGAAAATTTACATAGATGTCAATAAATCAAATTTAATTAACCTGCCC
ATTTATGTCCTACCATCGGTACAACTATTTGCAAGCGATCCAAATTTAGCTCCAATATTA
ATGGATGCTTGTGACCCAAAAAACGAAATGAGCGGAAGGTTCTTTCAAGATAATATTATG
GGAGGTCTTTTGGCACTATCAGTACTACCCCGCTCCAACAGCGGCCTGCCGGATTATTTT
GATAACCCTATGGACCAGGCTGCGACATCACTAATCGAGTCATCACTGTGGAATGCAACA
TCACATTTAACTAATTATATGCACAAAATATTTTTGAGCTTACTAAAAGGCGGACCGGAG
TTGAAAAATCGTTTGTTGACATGGATCGGAAAATGTTTAAAATATAATTCTCCTAGAGGG
AAACTTTGGAATGTTCAGACAAGTGACATAGGTTTGACAAATTGTGTCTCCGATGGATTC
ATGCTGAATCTCGGTGCTGTTTTACTACATCTGTGTCAACCGTTCTGCAACACAGCTGAC
GATCTCAAGGCACTCAAGATTGATCCAACGTATGGTGCTGTGTCTCCGGAGGAGGCTGCC
TCCAAGTCTGTCCACCTAAGTCTTCACAACGAGACCTGCCTACTACCAGCTCGGGAAACC
GACGACGGAACGCCGATCAAACGCCCAACAGCTGAGACATACAACTTCGTCACGGAATGC
TTCTTCATGACGCAGAAGTGTATCGATTTAGGTGTCCGTGTGTGTGCTGAGAAAATGTGG
CGTATAGGTCAGGAAGTGGGTCGAGCTCAGCGCGCGATGTCTGATGCTGGACCGGCTAGG
ATAATGGAATCGCTGAGACAGAGAGCAACATACCTTATGACGAAATTCGTGACATTCCGC
TGTGGTCTCCTGGAGAAGAAGATGCTAGCCAACCTACACCGTCTGCAGGCCACCACCTGC
ACGTGGCTGGTGCAGGTAGCGGCACGTGCTACCACCGTCGGCAACTACGCTCCAAACACC
ATGATGCAAATAGACATGCCAATAACCACCCCACCGCCAGATACGTTGAGATGCATTCCA
GAGTTTGTATTGGAGAATGTTGTTGTGTTGATAACAATGTCCCGCCGTACTGTGGGCGCT
ATCACCGACGACGCGGACATGGCCGGGTTATTACAACCCGCCCTCACACTTGTATTGACA
TTCATGGGTGATTCGACACGGACTTACAACCCGCATCTGAGGGCACGTTTGGCTGAATGT
CTGGAAGCAATGTTGCCAAACCATCCTGATGATCAGCAACCACTCAGCAACATCGCCTCC
TTCTACAGGGAACAGTTGTTTAAGGAACATCCACACAGACTTCAGCTGGTGACATGTCTT
CTGGATGTTTTCGTCGGCATTGAGATGACCGGGCAGAGCGTTCAGTTCGAGCAGAAGTTT
AACTATCGCCGACCGATGTACCTCGTCATGGACTTCCTGTGGGGCATAGAGGAGCATAGA
GAGGCCTTCACACGTCTCGCAAGAGAAGCTGAGGCGAATATGGAAGCTGTTCATCCACCG
ATTTTCCTTCGTTTCGTGAATCTATTAATGAACGACGCTATCTTCCTACTGGACGAGGCC
CTTGGAAATATGGCTCAGTTAAGGAACATGCAAACGGCACAAGAAACCGGCAGATGGCTG
AACCTATCAAGCGCTGAACGTGAGCAGAATTTAGCCAACATGTCCCATACTGGTATGCTA
GCGAGGTTCGATAACATACTTGGGCGGGACACTGTACGCACGCTCGTCAAACTAACATCA
CACGCCCCATACGTGTTCTGTCATCCGACGCTGGTTGAACGCATCGCATCCATGCTGAAC
TACTTCCTCCTACATCTAGTCGGACCAAATAAGAAGAACTTTAAGGTGAAAGACATGAAG
GACTACGAGTTCGAACCTGCGAACACTGTGCTGGACATCTGTCGTATGTACGTGCAGCTC
GGCAGTAACGAGAGGTTCTGTGCCGCCGTGTCAGATGATGGAAGGTCATACTCGCCTCAG
CTGTTCAAATTGGCTGAAGATGTTCTAGTACGCATCGGCGGTGGAGGTCTCATAGCATCT
CTCCAGGAAGTGGCATCCCATGTAAGCATACTAGCTGAACAACGTCAACGTGATGAAGAG
ATCCTCGCCAATGCTCCCGAGGAATTCCTGGATCCCATAATGAGCACCATAATGAGGGAT
CCCGTCATCTTGCCCAGCTCAAGGACAACAGTCGACAGAACCACCATAGCCAGGCATCTC
CTAAGCGATCAAACAGACCCTTTCAATCGATCTCCGCTGTCAATGGATCAAGTGAAATCT
AACACGGAACTTAAGGAGCGTATAGAAGCGTGGATTGCAGAACAGAAACAAAATATTACG
AAACCTGATACTGCTATGTAA
Protein sequence:
MSEPNNPFVGLLGVAEAKSTEGSNFDSTQISIDVHNVQGAEQLLVINNIIENVFFFTVNP
NAADKSSERQLVYLEELAQAMNPRIHIDLEALEQALFERLLLQDVEQQVIPKGSTVFKEH
VIQKQVFPYLFSSMENINSYSHINTPYVQDALNRMKELIFRNAVTALKQPALFEGQDFAE
QLVEILRQIVQQSPTFFIDLVKSFVAEGDRDCKKQLKDTMIPVLRKIYIDVNKSNLINLP
IYVLPSVQLFASDPNLAPILMDACDPKNEMSGRFFQDNIMGGLLALSVLPRSNSGLPDYF
DNPMDQAATSLIESSLWNATSHLTNYMHKIFLSLLKGGPELKNRLLTWIGKCLKYNSPRG
KLWNVQTSDIGLTNCVSDGFMLNLGAVLLHLCQPFCNTADDLKALKIDPTYGAVSPEEAA
SKSVHLSLHNETCLLPARETDDGTPIKRPTAETYNFVTECFFMTQKCIDLGVRVCAEKMW
RIGQEVGRAQRAMSDAGPARIMESLRQRATYLMTKFVTFRCGLLEKKMLANLHRLQATTC
TWLVQVAARATTVGNYAPNTMMQIDMPITTPPPDTLRCIPEFVLENVVVLITMSRRTVGA
ITDDADMAGLLQPALTLVLTFMGDSTRTYNPHLRARLAECLEAMLPNHPDDQQPLSNIAS
FYREQLFKEHPHRLQLVTCLLDVFVGIEMTGQSVQFEQKFNYRRPMYLVMDFLWGIEEHR
EAFTRLAREAEANMEAVHPPIFLRFVNLLMNDAIFLLDEALGNMAQLRNMQTAQETGRWL
NLSSAEREQNLANMSHTGMLARFDNILGRDTVRTLVKLTSHAPYVFCHPTLVERIASMLN
YFLLHLVGPNKKNFKVKDMKDYEFEPANTVLDICRMYVQLGSNERFCAAVSDDGRSYSPQ
LFKLAEDVLVRIGGGGLIASLQEVASHVSILAEQRQRDEEILANAPEEFLDPIMSTIMRD
PVILPSSRTTVDRTTIARHLLSDQTDPFNRSPLSMDQVKSNTELKERIEAWIAEQKQNIT
KPDTAM