| New model in OGS2.0 | DPOGS210110 |
|---|---|
| Genomic Position | scaffold1699:- 54864-55515 |
| See gene structure | |
| CDS Length | 390 |
| Paired RNAseq reads | 839 |
| Single RNAseq reads | 1915 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000219 (1e-53) |
| Best Drosophila hit | nuclear factor Y-box B (5e-26) |
| Best Human hit | nuclear transcription factor Y subunit beta (1e-32) |
| Best NR hit (blastp) | Nuclear transcription factor Y subunit beta, putative [Pediculus humanus corporis] (6e-36) |
| Best NR hit (blastx) | Nuclear transcription factor Y subunit beta, putative [Pediculus humanus corporis] (2e-34) |
| GeneOntology terms | GO:0016602 CCAAT-binding factor complex GO:0005515 protein binding GO:0005634 nucleus GO:0003677 DNA binding GO:0043565 sequence-specific DNA binding GO:0045893 positive regulation of transcription, DNA-dependent GO:0070491 transcription repressor binding GO:0005622 intracellular GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity |
| InterPro families | IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomerase IPR003958 Transcription factor CBF/NF-Y/archaeal histone IPR009072 Histone-fold |
| Orthology group | MCL14711 |
Nucleotide sequence:
ATGAAAAGGGCTATCCCTGAAAATGGAAAGATTGCTAAAGATGCGAGGGAATGTGTACAG
GAGTGTATATCTGAGTTCATATCATTTATAACAAGCGAGGCGAGTGATCGTTGTCAGATG
GAAAAGAGAAAAACCATTAATGGTGAAGATGTATTGTTTGCTATGAACGCACTGGGCTTC
GACAATTATGTAGAGCCCTTAAAGTTGTACTTAAAGAAGTACAGAGAAATTGTTCTATCA
CCTGTAACCATCAATAAGTTAAACAAAACAATTGTTTTATATGGAAGTGATGGCACACAA
TGTGTGGCAAACGATAATGACTCGGAGACGCAAACCCAGACAGTCATATACGGATATCCT
AAAGTTATCGGAGATTTTACAATATCTTAA
Protein sequence:
MKRAIPENGKIAKDARECVQECISEFISFITSEASDRCQMEKRKTINGEDVLFAMNALGF
DNYVEPLKLYLKKYREIVLSPVTINKLNKTIVLYGSDGTQCVANDNDSETQTQTVIYGYP
KVIGDFTIS