| New model in OGS2.0 | DPOGS210043 |
|---|---|
| Genomic Position | scaffold1699:+ 56481-63436 |
| See gene structure | |
| CDS Length | 2193 |
| Paired RNAseq reads | 1144 |
| Single RNAseq reads | 2854 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000473 (0.0) |
| Best Drosophila hit | pacman, isoform A (0.0) |
| Best Human hit | 5'-3' exoribonuclease 1 isoform a (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to 5-3 exoribonuclease 1 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to 5-3 exoribonuclease 1 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005515 protein binding GO:0005622 intracellular GO:0005737 cytoplasm GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0008409 5'-3' exonuclease activity GO:0071044 histone mRNA catabolic process |
| InterPro families | IPR004859 Putative 5-3 exonuclease |
| Orthology group | MCL12540 |
Nucleotide sequence:
ATGGGGGTACCGAAGTTTTTTAGATACACCAGTGAACGGTATCCTTGTCTTAATGAGTTA
GTTAAGCAGTATCAGATTCCAGATTTTGACAACATGTACCTGGATATGAATGGAATCATA
CACAACTGTTCTCATCCTGATGATTCCAATCCACATTTCCGTATCACGGAAGAGAAAATA
TTCAAAGACATATTCCATTACATCAGCATTTTGTTTCAAATTATTAAGCCCAAGAAGCTA
TTTTTTATGGCTATCGATGGTGTAGCCCCAAGAGCTAAAATGAATCAGCAGAGGGGAAGG
AGGTTCCGATCAGCAAGGGAAGCTGAAAAGTTAGAGGAAACTGCTAAAGAAAAGGGTGAG
GCTCTACCGACGGAAAAGAGGTTTGATAGCAACTGTATCACTCCCGGAACAGTGTTCATG
GCTCGTCTTCATGAACAGCTCAAATATTTTATCAAAGAGAAGATATCAACGGACCCTCTT
TGGTCCAAAGTTAAAGTTATTCTGTCCGGACATGAGACGCCCGGTGAAGGAGAACACAAA
ATAATGGATTACATTCGCTGGGCTCGCTCGCAGCCCGACTATGATCCCAGCACCAGACAC
TGCTTGTATGGACTCGATGCAGACCTCATTATGTTAGGAGTTTGCACACACGAACCACAC
TTTGCCTTGCTGCGAGAAGAGGTTAAATTTGGCAAAACAACTCAAAGGGCAACCAGCCCC
GAAGAAACTAATTTCTACTTGCTCCACCTATCACTACTAAGGGAATATTTGGAGCAGGAA
TTCATATCCATCAAGGATAATCTGCCATTCCCTTACGATATTGAAAATATTATTGACGAT
TGGGTTCTCATGGGGTTCTTAGTGGGCAATGATTTTATACCAAACTTGCCCAACATGCAT
ATCAGCAATGACGCTCTGCCGCTCCTGTACAAAACATACATGACTGTCCTGCCTACTTTG
GACGGCTATATAAATGAATCGGGAGATTTGAATTTAGGGAGGTTTGAAGTATTCATGCAG
GAGCTGGCTAAGATTGATAAAGAGAAATTTCAAGACACTTATGCCGACTTGAAATACTTT
GAAGCCAAAACTGGCAGACGGCCCAACGCTAACGAGAGGAGAGATTACAAGCCCAACAAT
GACGACACATTCAATGTCAACTTGGACGATATCAAAGCCAACAAGCCAGATGACGAACTG
CAGGCTCTTATTGATGCTACACAGGAAATGTTTATGGATGACATGAAGAGCGATGAAGAC
TATGAAGAAACTAGTGATGAGGAAGCGAACATGGAGATGGAATTCATTCTACATAAGAAA
GACTATTACATGAACAAGTTGGACTATTCAAAGGTTACCGACGAGGTGCTATCAGACCAA
GCCGAGTGTTATGTCCGAGCCATCCAGTGGAATCTGTGGTACTACTACCGAGGCTGCCCC
TCCTGGTGTTGGTACTACCCTCACCACTACGCTCCATACATCTCGGATATCAAGGACTTC
GGGAACATGAATATGGAGTTTGAGCTGGGAGAACCGTTCAAGCCCTTCGAGCAGTTGTTG
GCGGTGTTGCCAGGCGCCAGTAAGCACCTCCTGCCGACTCCGTTCCACGACCTGATGACG
GACGAGGACTCGCCCATAGTCCACTACTACCCGGTCTCCTTCGAGACCGACCTCAACGGG
AAGAAGAACGACTGGGAAGCTGTCGTCCTTCTGCCCTTCATCGACGAGACGAACCTGCTA
TCGGCCATGTCTCCTTGCTACCAGCGACTCACTGAAGAGGAATTGAAGAGAAATTCTCAC
GGACCGATGTTAGTTTACAACTGGACAGCTGACAGTTTAGGACCAATAATATCCCCGGAA
TATTTCCCATCGATAAAAGAAAATCACGCCGTGGAAAAGGCTGTGTGGCGACACGAGCTC
GACGTGCCGCTGCATCTGTTGAAGCGGGGGATGCTGCCCGACGCCGACAAGGACGTGCTG
TACCCGGGCTTCCCCACCATGCGCCACCTGAAGTACAAGACGAGTATAAAGAAGTGCAAG
GTGAAGGTTTTCGACCAGCCGTCGCGCAATGAGAATATGATGCTGCAAATTGTACCCACT
GCCACAACTGACCCCGCGCTAGAGGAACTGGCCGCCAAGATACTGGGCCAGGTCGTGTGG
GTCGGCTGGCCGCATTTAACACGGGCCAAGTAA
Protein sequence:
MGVPKFFRYTSERYPCLNELVKQYQIPDFDNMYLDMNGIIHNCSHPDDSNPHFRITEEKI
FKDIFHYISILFQIIKPKKLFFMAIDGVAPRAKMNQQRGRRFRSAREAEKLEETAKEKGE
ALPTEKRFDSNCITPGTVFMARLHEQLKYFIKEKISTDPLWSKVKVILSGHETPGEGEHK
IMDYIRWARSQPDYDPSTRHCLYGLDADLIMLGVCTHEPHFALLREEVKFGKTTQRATSP
EETNFYLLHLSLLREYLEQEFISIKDNLPFPYDIENIIDDWVLMGFLVGNDFIPNLPNMH
ISNDALPLLYKTYMTVLPTLDGYINESGDLNLGRFEVFMQELAKIDKEKFQDTYADLKYF
EAKTGRRPNANERRDYKPNNDDTFNVNLDDIKANKPDDELQALIDATQEMFMDDMKSDED
YEETSDEEANMEMEFILHKKDYYMNKLDYSKVTDEVLSDQAECYVRAIQWNLWYYYRGCP
SWCWYYPHHYAPYISDIKDFGNMNMEFELGEPFKPFEQLLAVLPGASKHLLPTPFHDLMT
DEDSPIVHYYPVSFETDLNGKKNDWEAVVLLPFIDETNLLSAMSPCYQRLTEEELKRNSH
GPMLVYNWTADSLGPIISPEYFPSIKENHAVEKAVWRHELDVPLHLLKRGMLPDADKDVL
YPGFPTMRHLKYKTSIKKCKVKVFDQPSRNENMMLQIVPTATTDPALEELAAKILGQVVW
VGWPHLTRAK