| New model in OGS2.0 | DPOGS203203 |
|---|---|
| Genomic Position | scaffold4990:+ 1443-4724 |
| See gene structure | |
| CDS Length | 1698 |
| Paired RNAseq reads | 344 |
| Single RNAseq reads | 1031 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011089 (4e-25) |
| Best Drosophila hit | Sex comb on midleg (3e-115) |
| Best Human hit | polycomb protein SCMH1 isoform d (6e-79) |
| Best NR hit (blastp) | PREDICTED: similar to lethal(3)malignant brain tumor [Tribolium castaneum] (2e-166) |
| Best NR hit (blastx) | PREDICTED: similar to lethal(3)malignant brain tumor [Tribolium castaneum] (1e-148) |
| GeneOntology terms | GO:0005634 nucleus GO:0003704 specific RNA polymerase II transcription factor activity GO:0045449 regulation of transcription GO:0016458 gene silencing GO:0005515 protein binding GO:0008270 zinc ion binding GO:0030713 ovarian follicle cell stalk formation GO:0030708 germarium-derived female germ-line cyst encapsulation GO:0035102 PRC1 complex GO:0007409 axonogenesis GO:0022008 neurogenesis |
| InterPro families | IPR004092 Mbt repeat IPR021129 Sterile alpha motif, type 1 IPR010507 Zinc finger, MYM-type IPR001660 Sterile alpha motif domain IPR010993 Sterile alpha motif homology IPR013761 Sterile alpha motif-type |
| Orthology group | MCL12241 |
Nucleotide sequence:
ATGTCAAACAATACTGTCGGCTCGTCAGGGCATGCTCCCGGCAAAATACGTGGACCTGGA
AGACCCCCTAAACGGACATGCACTTGGTGTGCTGAGAGTAAAACGCCTTTGAAGTATGTT
TTGCCTACGGAAAATGGGAAAAAAGAATTTTGTTCAGAAACGTGTTTGTCAGAATTCCGA
CAAGCATATAGCAAAGGCGCTTGTCTTCACTGTGACAATGTTATACGCGGCAATGCTCCA
TCCAGTAGCAAAAATTTTTGTTCGACGTATTGTTTAAATAAATATCAAAAGAAAAATGAG
AAGAGAACAACTTCGCCGCAATCAGGGAATGGAGCGAACGGTACCGAACCTCATCAGAAC
AATAATTCGACAGGATCGTTCTATGACATATACCAGTCGTTTGATTGGAATGAATATATG
AAGGAAACTAATAGTGTTGCTGCACCCCAAGAGTGTTTTAAGCAAGCTCCAAATCCTCCA
GTGAATGACTTTAAAGTTAATATGAAACTCGAAGCTTTGGACCCTCGTAATTTGACATCA
ACTTGCATTGCTACAGTTGTTGGTGTATTGGGTCCAAGATTGAGGCTTAGACTTGATGGA
AGTGATAATAAAAATGATTTTTGGAGGCTTGTTGATGCTGGTGATATTCATCCTATAGGT
TATTGTGAGAAAAATGATGGTATGTTGCAACCACCTCTTGGTTTTCGTATGAATGCCAGC
AGTTGGCCTATGTTCTTGCTAAAAACATTAAATGGGGCGGAGATGGCTCCATCAAAGGTC
TTTCAACCTGAACCACCTACTCCTAAATCAAATTTGTTTGTTGTTGGTCAAAAATTAGAA
GCTGTTGATAAAAAAAATCCACAACTTATATGTTGTGCAACTGTTGGTGCCGTGAAAAAT
GATCAGATACATGTTACTTTTGATGGTTGGAGGGGGGCTTTTGATTACTGGTGTAAATAT
GACTCTCGAGACATATTTCCTGTTGGCTGGTGTGCAAGAGCAGGTCACTTATTACAGCCA
CCTGGTCAAAAAAGTGCTACAGCGCCTTCTAGATTTAAATTGCGTCCCAGTGGTATTCCT
AATCCAGCTTTACCAGAAGGGGGATCAACTGGTACAGGCAATGCAAATGGAGCTAACACT
GTAACTCCATTAGCAAATGTTGTTTTACGTATCCGTAATAGTTGTTCTGGAGGGAACGCC
GCCTTACCATCCTCCATCACCGGTGTCGGTGCTTCAGGTGTAGCTGAAAACCTAGTTAAA
GAGTTACTTGTCACATATACAGATCCTCAAAAACTCACAAGGGCAATACTTACTGCATCA
AATAGCTATTCAAATAATACTAATGTACAGGAGTCTCCAACTCCATGCACTAATGGCGAT
TCCGGTTGTAAGCTGGCTCGTGTGTCTCCTGAACGTCCTGAGCCGGCGTCATCGACTACG
TGTGCCCCCCCTCCCCCTGCCCCCGCCGCCGCCCCCGCTGACTGGTCCGTGGAGGATGTC
ATCGGATTTATCGCTGCAGCTGACCAAGCTCTTGCCGCCCATGCTGATCTATTCAGGAAG
CATGAAATAGATGGCAAGGCGCTCTTGTTATTGAATTCTGACATGATGATGAAATACATG
GGTCTGAAACTTGGTCCCGCCTTAAAAATATGCAATTTGGTATCTAAAATAAAAAATCGT
CGACATTATAGCACCTAG
Protein sequence:
MSNNTVGSSGHAPGKIRGPGRPPKRTCTWCAESKTPLKYVLPTENGKKEFCSETCLSEFR
QAYSKGACLHCDNVIRGNAPSSSKNFCSTYCLNKYQKKNEKRTTSPQSGNGANGTEPHQN
NNSTGSFYDIYQSFDWNEYMKETNSVAAPQECFKQAPNPPVNDFKVNMKLEALDPRNLTS
TCIATVVGVLGPRLRLRLDGSDNKNDFWRLVDAGDIHPIGYCEKNDGMLQPPLGFRMNAS
SWPMFLLKTLNGAEMAPSKVFQPEPPTPKSNLFVVGQKLEAVDKKNPQLICCATVGAVKN
DQIHVTFDGWRGAFDYWCKYDSRDIFPVGWCARAGHLLQPPGQKSATAPSRFKLRPSGIP
NPALPEGGSTGTGNANGANTVTPLANVVLRIRNSCSGGNAALPSSITGVGASGVAENLVK
ELLVTYTDPQKLTRAILTASNSYSNNTNVQESPTPCTNGDSGCKLARVSPERPEPASSTT
CAPPPPAPAAAPADWSVEDVIGFIAAADQALAAHADLFRKHEIDGKALLLLNSDMMMKYM
GLKLGPALKICNLVSKIKNRRHYST