| New model in OGS2.0 | DPOGS214034 |
|---|---|
| Genomic Position | scaffold391:+ 54-4874 |
| See gene structure | |
| CDS Length | 2028 |
| Paired RNAseq reads | 3042 |
| Single RNAseq reads | 7828 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008317 (2e-21) |
| Best Drosophila hit | beta amyloid protein precursor-like (9e-57) |
| Best Human hit | amyloid beta A4 protein isoform e precursor (2e-13) |
| Best NR hit (blastp) | amyloid precursor protein [Manduca sexta] (0.0) |
| Best NR hit (blastx) | amyloid precursor protein [Manduca sexta] (6e-103) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0005576 extracellular region GO:0007399 nervous system development GO:0005515 protein binding GO:0016021 integral to membrane GO:0007422 peripheral nervous system development GO:0048812 neuron projection morphogenesis GO:0048678 response to axon injury GO:0050808 synapse organization |
| InterPro families | IPR008154 Amyloidogenic glycoprotein, extracellular IPR019543 Beta-amyloid precursor protein C-terminal IPR019744 Amyloidogenic glycoprotein, extracellular domain conserved site IPR019745 Amyloidogenic glycoprotein, intracellular domain, conserved site IPR011178 Amyloidogenic glycoprotein, copper-binding IPR008155 Amyloidogenic glycoprotein |
| Orthology group | MCL14192 |
Nucleotide sequence:
GAAGGTCCATTCCAATCGGATGCGCTGCTCGTCCCCGAGAGCTGCCTGTTCGACCACATC
CACAACCAGAGCCGATGCTGGCAGTTCTCTCGCTGGAACGCTACAGCCGGCCGCGCCTGC
GCCCAGAGAGGACTCCGCCTCAGGACCTTCGCGATGCTCCTACCCTGCGGAATCAGCCTG
TTCTCTGGAGTCGAATTCGTATGCTGCCCTAAACATTTTAAGGAAAACGTGAAAATGCAC
AAACCAATGGATGTGGGCGTGCCAGTTAGCCCTGGTGGTGAAGAGATGCTGGCTGCCTCC
GCTGCTATGGACGAGCGAGATGATGATCTCCTCGACGATGAAGACACCCTCACTGACGAC
GATGACGACACCCTCAACCTCAGCGACGACGATGACGACGATGACGCTGATGACGATATG
GATGAAGATGAAGACGCTGATCTTACCCGCGATGATGACGCCGAAGACGACGATTACACG
GACGGTGATGACTCCGGCTGGCCGCGACCTGACTCCTCCGCCGCGCCGTCTACCACCACG
CCTACCACCACCACCACGACCACCACCACTACGCCGGCTTCCACCGCTACCTCCGACCCC
TACTTCTCTCACTTCGACCCTCGCACCGAACACCAGAGCTACAAGGACGCCCAGCAACGA
CTCGAGGAGACTCACCGCGAGAAGATTACTAAGGTGATGCGTGACTGGTCTGAACTAGAG
GACCGATATCAACAGATGATGACCTCTGACCCCGCTGCCGCCCAAAGCTTCCGCCAACGC
ATGACCGCCAGGTTCCAAGCCAACATTCAGGCCCTCGAAGAGGATGGTGTATCTGAACGT
CGCCGTCTGGCCGCCCTTCATCAGCAACGAGTGTTGGCTCACCTGGCACAAAGACGACGC
ACCGCCCTCTCGTGTTACACACGGTCCCTGAAAGACGCTCCTCCCAATGCCCACCGCGTC
CAGAAGTGTCTTCAGCGTTTGGTCCGCGCCCTCGCCGCCGAGAGATCAGGAGCGCTGGCC
GCCTGGCGCCGTGCTGCTTCAGCCGGCCGTGAAGCCGCTGCCGCTGAACGAGCGAGTGCT
GTGGACAGACTGCAGGACGCCGACCGCGCTCTCCAACGGGCGTTAACGTCCCTCCGCCGC
CGCCCGCACTTGTACGCTAGCATCGGAACTGCTATCGAGGACTACGTTCAGTCCATGCAG
TCCAAGGACGACATGGCCGTCTCCCTGATGTCGATGACTCCTGAGGCTGAGGAACTCCTT
CTGGACCGTATCGAAGCCGAGGTCCAAAGAGAGCAGGCTGCTCGGGAACAACTGAACGCC
AAGAGAGACCAGAGGACCAGGCAGAGGCAGGACATTGAAAACGAACGCGTCAGGACTTCC
AACGGTGTGAAAGAGAGCGAAGAGGCTGATGATGAAGCCAGTGAAGTCAGCGACACCGAG
GACACCACCACCGTTTCTACGACGCAGAGCTCCCCCTCCCCCTCTCCCTCACCCTCACCG
CCGGCCACGCCCACCGTCCGTGACATCACCACCAGATCAGCCTTCACCCAGGAAACCACA
ACCACGGAGATCGTGACCAGTACGATGACGGACGCCCCCGAGATAGACACGGAGACCAGC
GAAGTGGTGGAGACGACCAGCAGGAGACCAACCAGCGAATCCGAGGGTTCGGGACTCCGC
GCGGCGCTGGAGCAGGCCGAGGAGCGTGCGCCCCCGCCGCCCGCACACGCCCTCAAACAT
GAACTACAACACTCACAGCCCGGCTATACAATCCGCGGTCCGTCACCGTCCCCGGGCTCG
GGTGCTCTGTACCCGGCCCTGTGTGTGGGTGGAGCGGCGCTGGCGGCCGCAGCAGCTGTC
GCGCTCGCTGTGGCACGACGACGTGACCGCGCTCCATCCGCTCAAGGATTCGTGCAGGTG
GAGCAAACCGGCGCCGTGGCTCCGACTCCTGAAGAGCGACACGTCGCCAACATGCAGATC
AATGGTTACGAAAACCCAACCTACAAATACTTCGAGGTCAAGGAGTAA
Protein sequence:
EGPFQSDALLVPESCLFDHIHNQSRCWQFSRWNATAGRACAQRGLRLRTFAMLLPCGISL
FSGVEFVCCPKHFKENVKMHKPMDVGVPVSPGGEEMLAASAAMDERDDDLLDDEDTLTDD
DDDTLNLSDDDDDDDADDDMDEDEDADLTRDDDAEDDDYTDGDDSGWPRPDSSAAPSTTT
PTTTTTTTTTTPASTATSDPYFSHFDPRTEHQSYKDAQQRLEETHREKITKVMRDWSELE
DRYQQMMTSDPAAAQSFRQRMTARFQANIQALEEDGVSERRRLAALHQQRVLAHLAQRRR
TALSCYTRSLKDAPPNAHRVQKCLQRLVRALAAERSGALAAWRRAASAGREAAAAERASA
VDRLQDADRALQRALTSLRRRPHLYASIGTAIEDYVQSMQSKDDMAVSLMSMTPEAEELL
LDRIEAEVQREQAAREQLNAKRDQRTRQRQDIENERVRTSNGVKESEEADDEASEVSDTE
DTTTVSTTQSSPSPSPSPSPPATPTVRDITTRSAFTQETTTTEIVTSTMTDAPEIDTETS
EVVETTSRRPTSESEGSGLRAALEQAEERAPPPPAHALKHELQHSQPGYTIRGPSPSPGS
GALYPALCVGGAALAAAAAVALAVARRRDRAPSAQGFVQVEQTGAVAPTPEERHVANMQI
NGYENPTYKYFEVKE