| New model in OGS2.0 | DPOGS212877 |
|---|---|
| Genomic Position | scaffold238:- 217188-219873 |
| See gene structure | |
| CDS Length | 618 |
| Paired RNAseq reads | 119 |
| Single RNAseq reads | 479 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013896 (1e-11) |
| Best Drosophila hit | Rrp46 (5e-34) |
| Best Human hit | exosome complex exonuclease RRP46 (2e-35) |
| Best NR hit (blastp) | exosome complex exonuclease RRP46 [Culex quinquefasciatus] (6e-51) |
| Best NR hit (blastx) | exosome complex exonuclease RRP46 [Culex quinquefasciatus] (4e-48) |
| GeneOntology terms | GO:0000175 3'-5'-exoribonuclease activity GO:0003723 RNA binding GO:0005515 protein binding GO:0006396 RNA processing |
| InterPro families | IPR001247 Exoribonuclease, phosphorolytic domain 1 IPR020568 Ribosomal protein S5 domain 2-type fold IPR015847 Exoribonuclease, phosphorolytic domain 2 |
| Orthology group | MCL15515 |
Nucleotide sequence:
ATGAAATGTGAACTTAATTTTCTTAGCAGATCTGATGGTTCGGCGATCTTATCTCAAGGT
GAAACTGTGGTCACAGTAAGTGTTAATGGTCCATTGGACATCAAGACAACTAGCCAGAGT
ATAGAGAAGGCGACTCTTGAAATTCTGTTCAGTAGCAAGGGAGGGAAACCGTCAGTTGCT
GATCGGTTTAAAGAAAATGTAATCAGACAGACATGTGAAACAGCTATATTGGGTTGCCTG
TATCCTCGGACCGGAATAACGATTACAATACAAGAATTAGAAGACTATGGAGGGCTCCTT
TCCTGTGCAATCAACTGTGCATGTCTAGCTCTTCTCAACAGTGGTATATCGTTACATCAC
GTAGTGGCAGCCGTCAGTTGTATTGTGGATGAAACTGGAAATATTGTACTGGAACCTTCA
TATCAGCAGGTTCAGTCGGCCACAACAAAATTGTACTTTGTGTTTGATAGCAGAGATAAG
AATCTCGTTACAGGTTTCACTGAGGGTGCTGTCGGTGAAGACATGTACCTTGAGGCTTTA
GAGAAATGCCGTGCAGCCAGTGACCTGGTCTTCGACTTCTATAGGGATGTAGTGAGGAAA
TACAGTGATGTTATATAA
Protein sequence:
MKCELNFLSRSDGSAILSQGETVVTVSVNGPLDIKTTSQSIEKATLEILFSSKGGKPSVA
DRFKENVIRQTCETAILGCLYPRTGITITIQELEDYGGLLSCAINCACLALLNSGISLHH
VVAAVSCIVDETGNIVLEPSYQQVQSATTKLYFVFDSRDKNLVTGFTEGAVGEDMYLEAL
EKCRAASDLVFDFYRDVVRKYSDVI