Genomic Position | scaffold238:+ 133042-183519 |
---|---|
See gene structure | |
CDS Length | 519 |
Paired RNAseq reads   | 189 |
Single RNAseq reads   | 744 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011254 (3e-23) |
Best Drosophila hit   | homothorax, isoform H (3e-60) |
Best Human hit | homeobox protein Meis2 isoform h (4e-37) |
Best NR hit (blastp)   | homothorax [Tribolium castaneum] (2e-79) |
Best NR hit (blastx)   | homothorax [Tribolium castaneum] (1e-71) |
GeneOntology terms    | GO:0007422 peripheral nervous system development GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0003677 DNA binding GO:0007479 leg disc proximal/distal pattern formation GO:0007420 brain development GO:0048749 compound eye development GO:0007432 salivary gland boundary specification GO:0010092 specification of organ identity GO:0009954 proximal/distal pattern formation GO:0001752 compound eye photoreceptor fate commitment GO:0043565 sequence-specific DNA binding GO:0007380 specification of segmental identity, head GO:0007480 imaginal disc-derived leg morphogenesis GO:0035282 segmentation GO:0048735 haltere morphogenesis GO:0007476 imaginal disc-derived wing morphogenesis GO:0007383 specification of segmental identity, antennal segment GO:0010552 positive regulation of gene-specific transcription from RNA polymerase II promoter |
InterPro families    | IPR001356 Homeobox IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
Orthology group | MCL10435 |
Nucleotide sequence:
ATGCCAGACGCAAAGCAGATAAGCGCGCTCGAGACATCTCTCGCGATTCTTGATCGCTCG
CTGTTGAGATTAACACGTGACGCCAGCAATGCGAGTATCGGTTCTGGCGAGGGTACGGGG
GAAGAGGATGACGACACAAATGGAAAAAAGAACCAGAAGAAAAGAGGAATCTTTCCGAAG
GTAGCCACCAACATCCTCCGGGCGTGGCTGTTCCAACACCTAACGCATCCGTACCCTTCG
GAGGATCAGAAAAAGCAGTTGGCGCAAGATACAGGGTTAACAATACTACAAGTAAATAAT
TGGTTTATCAACGCGAGACGTAGGATAGTCCAGCCGATGATCGACCAGTCCAATAGAGCA
GTGTTCCCACATGCGGGGCCCAGCGGTGCCTACAGCCCGGAGGCTACCATGGGCTACATG
ATGGACGGACAGCAGATGATGCACAGGCCTCCCGCGGACCCCGCCTTCCACCAGGGTTAC
GCGCATTACCCCGCCGAGTACTACGGCCACCATCTTTAA
Protein sequence:
MPDAKQISALETSLAILDRSLLRLTRDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPK
VATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRA
VFPHAGPSGAYSPEATMGYMMDGQQMMHRPPADPAFHQGYAHYPAEYYGHHL