| New model in OGS2.0 | DPOGS203619 |
|---|---|
| Genomic Position | scaffold1528:+ 47081-55907 |
| See gene structure | |
| CDS Length | 2589 |
| Paired RNAseq reads | 841 |
| Single RNAseq reads | 2305 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007288 (0.0) |
| Best Drosophila hit | CG8605 (8e-32) |
| Best Human hit | RAD50-interacting protein 1 (5e-41) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (5e-75) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (2e-65) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006810 transport GO:0005783 endoplasmic reticulum GO:0016020 membrane GO:0015031 protein transport GO:0007049 cell cycle GO:0016192 vesicle-mediated transport |
| InterPro families | IPR007528 RINT-1/TIP-1 |
| Orthology group | MCL13270 |
Nucleotide sequence:
ATGAAGTCTCATTTGAAAGATGACGTCAAAAAAGAAATAATACAAAAACTAAACTATAAA
ATCGGTGGCGATATTAACAATTTAGTAAACGCATACGAAGTGGAAAATGAGTGCGTGCTT
CAGAGAAATCAACTTAAAAGCTTGCTGAATGCTGCTAGCGATGAAGTACCCAACAAACTA
TCCTCAGCAATCGCTAAAGCCGAATGTAATTCACAACAGATTGACCAATTGAGAGAGAAA
AGAATTGAATTGATGAAAAAAGTAGATGGCTTCATTGAGAAAACCCAGCCATTGATGTCT
GAGTTGAATAAAAGATTTGCAGATATTGGTAGACTTGAAGAAGTTTTGTCTTATTTTAAG
TCATATGCTAGAATTGAGGAATTGAGTAATCAGATGAAACAATGCAAAGATGATGAACAG
TTGGTCGCCATGTTCGGCGAGATGAAGGAGATGTGCTCCAGATACAAGCAACCACACCAA
CAGACATACATCAAGGATTATACACACTATTGGCATAACATACTCAAGGACAACTTCACG
AGAAATTATGAAGATGTTCTCAAAGCGCTAAAGTGGCCCTTCACGTCACAATCTGAGATT
GCACCTACCAAGGAAGTGATGAGCAAATTTACAACTGTCACCAGACATCTGTTCCTGGTA
CAGGAACCTAAATCAATGGTTGTATCAATATCTGGTGACTTCAGTCAAGAAACAGAACCG
TCATTGCCAATAAAATTACTACTGAAGCCTCTCAAGAAGAGGTTTATCTTCCACTTCACT
GGATCCCGTCAGACAGCCAGGATCGATCGACCTGAGTGGTTCCTAACTCAAACCTTGACT
TGGATCAAAGACCATCAAGATTTTGTCAAAAACCATGTACAGCCTATCGCTGAAAAACTA
AACATGAAAAACGTTAACACAGTGGATGAGTTCAACGTCGGTATAATATCATTGGCGGCG
GAGCGTCTTCACACTGTGTTAGGGATCTACCACACTCAAACCAAACACGTCCTGGATGTA
GACGCGGCGTTCGCGCACGCTGTGGACGAGACCTTAGGATTTCACAGAGAACTTGTTAAC
ATTACCGGCGGGGAACTGAACAGCGTACTCTCCGTGCTCACTAGGGCTGAGACCTTTGTT
AGATGGCTGGCCGTAGAGAAGAAATATGCTCTGTCCAAGATGGATGAAACCCTCGATAAT
AGCCAGTGGATTGAGCCGGTGGCTTCAGGCGTTGTATCAGCCGTGGGTTCAGTACTTTGG
GTTCCTCGGGGTGCTGATTGGTTCATAGCCTTATTAAAGACCATAGAAGACAGATACGCC
ATGCTCCCACAGCCAGGACACAGAGAAGATGGCTGGAATCTATCAAACACCAGGGACCTT
CTTCTTAAAAATATAAAATCCCATGTCCGTAACCACACCGCAGGACCTCAAGACACCGTA
AGCGCATTCTGCCGGCATCCGGAGCGGTTACAATTCCTGGAACTACAGCTGGAACTGATC
GAGGAGTGGCGTATTCGTTTAACCCAGCTGTTGGGGGCGGCTATGACGTCACTCACTCCC
GACACCTTCCTCACAGCCGGGCCCCATCCTCTTATAGCGATCATAAACACAGCTCATCAC
ACGAGGAACGTACTGTTGCAGTGGGCCAATTCATTGCACTACCTGCAGCTACACTACTAC
AAGCGTCAGTTCCAGCACTTCACACAGCAGCAGCACAAGGAGGAGAGCGACGAGAGTGTG
TGCGATGACGAATACTACTATGACGAAGACGATAGGACCGAGGACACGCGCAGCAAAGAC
GAAGACCAAATGGAGGAAGCGCTATCGTTAAACGACGTCGAGGTCCGCGCGAAGAAGATG
GCGCTGAACGAAATAAAGAGACGGAACTCTGTTGTTAACGAGAGCCAATATGATGTTCCG
GGTGCAAGTCCGTCGAGTTCGGAGGTCGAGGAGGGTGCGGTGTTCTGTGAGTCGCCAGCG
CTGCTCGCTCACCTCAGAGACGCGGGGATCGCGGCGCTGGCTGAGCATATACTGCTGGAG
TTCAAGGCCACCATTCGGGAATACAAGAAACAAAAATGGCACTCCATGGTAACTATGGAG
CAGGCCGCGTTGTCAGTATCCGCGCCGCTGTGTGCGCCACTGTCTGGTGCTATATCACGT
GCTGGCTGCGCCGCCGGCACACTTTCTCCGAGACTCGCGGAACACCTGATGACGCACCTC
GCTGCGTGCATCGACATGTACCTGTTCGAGGAAGTAGTTCTGGAGAGCTGGTTCAATACG
GGCGGGACCTTGCAGTTCACACACGACGTTAAAAGAAACCTCGTGCCCGCGTTCGCTCCA
GCAAATAAAAATGCCTCCAAATTGAATCACCTCCCGAGGCTCTTGGAAGCCTGCAAACTT
CTGAACTTGGACTACGACGACGCAAGACGGCTCCGTTCACACTTATCGAAACAGCCGAAC
GAGATGTCCGATTATTTGACGAACCTTAACATAAATCATATCAAACCAGCCGAAGCTCTA
CGCATTCTGAACCAACGAACAGATCTCGCAGACACCACTTCGCCGTCGTCAGTCATGGAA
CTATTCTGA
Protein sequence:
MKSHLKDDVKKEIIQKLNYKIGGDINNLVNAYEVENECVLQRNQLKSLLNAASDEVPNKL
SSAIAKAECNSQQIDQLREKRIELMKKVDGFIEKTQPLMSELNKRFADIGRLEEVLSYFK
SYARIEELSNQMKQCKDDEQLVAMFGEMKEMCSRYKQPHQQTYIKDYTHYWHNILKDNFT
RNYEDVLKALKWPFTSQSEIAPTKEVMSKFTTVTRHLFLVQEPKSMVVSISGDFSQETEP
SLPIKLLLKPLKKRFIFHFTGSRQTARIDRPEWFLTQTLTWIKDHQDFVKNHVQPIAEKL
NMKNVNTVDEFNVGIISLAAERLHTVLGIYHTQTKHVLDVDAAFAHAVDETLGFHRELVN
ITGGELNSVLSVLTRAETFVRWLAVEKKYALSKMDETLDNSQWIEPVASGVVSAVGSVLW
VPRGADWFIALLKTIEDRYAMLPQPGHREDGWNLSNTRDLLLKNIKSHVRNHTAGPQDTV
SAFCRHPERLQFLELQLELIEEWRIRLTQLLGAAMTSLTPDTFLTAGPHPLIAIINTAHH
TRNVLLQWANSLHYLQLHYYKRQFQHFTQQQHKEESDESVCDDEYYYDEDDRTEDTRSKD
EDQMEEALSLNDVEVRAKKMALNEIKRRNSVVNESQYDVPGASPSSSEVEEGAVFCESPA
LLAHLRDAGIAALAEHILLEFKATIREYKKQKWHSMVTMEQAALSVSAPLCAPLSGAISR
AGCAAGTLSPRLAEHLMTHLAACIDMYLFEEVVLESWFNTGGTLQFTHDVKRNLVPAFAP
ANKNASKLNHLPRLLEACKLLNLDYDDARRLRSHLSKQPNEMSDYLTNLNINHIKPAEAL
RILNQRTDLADTTSPSSVMELF