| New model in OGS2.0 | DPOGS205538 |
|---|---|
| Genomic Position | scaffold7397:- 1309-4355 |
| See gene structure | |
| CDS Length | 573 |
| Paired RNAseq reads | 70 |
| Single RNAseq reads | 299 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000088 (2e-25) |
| Best Drosophila hit | CG9904 (1e-49) |
| Best Human hit | seipin isoform 2 (2e-41) |
| Best NR hit (blastp) | PREDICTED: similar to CG9904-PA isoform 1 [Apis mellifera] (3e-62) |
| Best NR hit (blastx) | PREDICTED: similar to CG9904-PA isoform 1 [Apis mellifera] (2e-60) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0005783 endoplasmic reticulum GO:0005789 endoplasmic reticulum membrane GO:0008150 biological_process GO:0016020 membrane GO:0016021 integral to membrane GO:0030176 integral to endoplasmic reticulum membrane |
| InterPro families | IPR009617 Adipose-regulatory protein, Seipin |
| Orthology group | MCL14031 |
Nucleotide sequence:
ATGTATATTGTGTTTTACTATACATATATGCCAAATGTGACACACGTACGACCTGTGCAT
CTTCAGTTCAAATCCTGCGATGAAAACATGGGAGTGTGCTCGTTCCCCTCAGCCCATGTC
CAGTTGACCCGTCGGAATCAAGTGTTGATGTCCTCACAACCGTATAAAGTACGTCTTGTT
ATGGATGTGCCGGAAACACAGATTAATAAGGACTTAGGTATGTTCATGGTGTGCGCTCAA
ATGAGAGCTTCTGGTGGCGCGCTGGTGTCATCGTCCTGTCGCTCGGCGATGTTGAAACAC
AGATCGAAATTGCACCACGTGTTACGTGTTCTGGCTTTCGCTCCACTATTGTTATCAGGT
GTCAATGAGGAGAAGCAAACGATTCAGGTTGAGCTTTTCAGCGACTTTGAAGACGATCAG
TCACACCCGGTGACGGACGCGTACGTTGAGCTCCAGTCGCGATACATCCAAGTGCTGTCT
TGTGAGTTACATATAGAAGCTCACTTCACAGGGCTGAGATACGTCATGTACTACTGGCCG
AAAGTATCGGCTCTCATTGGTGAGACGCAGTAG
Protein sequence:
MYIVFYYTYMPNVTHVRPVHLQFKSCDENMGVCSFPSAHVQLTRRNQVLMSSQPYKVRLV
MDVPETQINKDLGMFMVCAQMRASGGALVSSSCRSAMLKHRSKLHHVLRVLAFAPLLLSG
VNEEKQTIQVELFSDFEDDQSHPVTDAYVELQSRYIQVLSCELHIEAHFTGLRYVMYYWP
KVSALIGETQ