| New model in OGS2.0 | DPOGS205796 |
|---|---|
| Genomic Position | scaffold143:- 112750-119867 |
| See gene structure | |
| CDS Length | 1260 |
| Paired RNAseq reads | 1441 |
| Single RNAseq reads | 3774 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010356 (2e-169) |
| Best Drosophila hit | synaptotagmin 1, isoform A (2e-144) |
| Best Human hit | synaptotagmin-1 (2e-102) |
| Best NR hit (blastp) | synaptotagmin I [Bombyx mori] (0.0) |
| Best NR hit (blastx) | synaptotagmin I [Bombyx mori] (6e-174) |
| GeneOntology terms | GO:0007269 neurotransmitter secretion GO:0016192 vesicle-mediated transport GO:0008345 larval locomotory behavior GO:0030285 integral to synaptic vesicle membrane GO:0005509 calcium ion binding GO:0006887 exocytosis GO:0005544 calcium-dependent phospholipid binding GO:0016020 membrane GO:0048489 synaptic vesicle transport GO:0008021 synaptic vesicle GO:0007317 regulation of pole plasm oskar mRNA localization GO:0016079 synaptic vesicle exocytosis GO:0005515 protein binding GO:0031594 neuromuscular junction GO:0048488 synaptic vesicle endocytosis GO:0005215 transporter activity GO:0050803 regulation of synapse structure and activity GO:0048791 calcium ion-dependent exocytosis of neurotransmitter |
| InterPro families | IPR001565 Synaptotagmin IPR020477 C2 region IPR018029 C2 membrane targeting protein IPR000008 C2 calcium-dependent membrane targeting IPR008973 C2 calcium/lipid-binding domain, CaLB |
| Orthology group | MCL14693 |
Nucleotide sequence:
ATGTCGCCAGTCCTGTCAACGCAGCTGCGATGGCGGCGCGATGCGGAAGTGACCTCCGAA
AAACCCGCTTCAAATGGCACTACACCCTCGCCCATGCCGCCGCCTGCAACCACCACCCAG
GAGTCGATTGTTGAAAAGACCGCTGAAATTGCCCATAAGATGAATATGGAGACATGGCAG
TTAGTAGCTATTCTTGTCGGTGTGGCTGTTGTGGTGCTCGGTATTTGCTTCTGTTGTATT
CGACGATGTTTCCGCAAACGACGTTCCAAGGATGGCAAGAAAGGCATGAAGGGAGTCGAC
TTCAAGTCCGTCCAACTATTAGGTTCAGCTTACAAAGAAAAGGTTCAGCCGGACATGGAG
GAGCTCACAGAGAACGCTGAAGAACCTGATGACGGAGAAGAGAAGAAAGAGGAACAGAAA
TTAGGAAAACTACAGTACAAGCTGGAATATGACTTCAACAGTAACAGTCTATCAGTCACT
GTTATACAAGCGGAAGAGCTACCTGCTTTGGATATGGGAGGGACATCTGATCCTTACGTA
AAAGTTTACCTCTTGCCAGACAAGAAGAAGAAGTTTGAAACCAAAGTACATAGAAAAACT
TTGAACCCGGTATTCAACGAAACGTTCGTTTTCAAGAGCGTGCCGTATGCTGATGCGATG
AACAAAACTCTCGTGTTCGCTATCTTCGACTTTGATCGATTCTCCAAGCACGACCAGATC
GGAGAGGTGAAGGTACCTCTGTGTCAGGTGGACCTCGCGCAGACCATTGAGGAGTGGCGC
GAGTTGCAGAGTGTTGAGGGTGAAGGAGGACAGGATAACAAGCTGGGAGATATTTGTTTC
TCCCTGCGTTATGTACCAACCGCTGGAAAACTGACCGTTGTTATTTTGGAGGCTAAGAAT
TTAAAGAAAATGGACGTTGGTGGTTTGTCAGATCCGTACGTAAAGATAGCACTCATGCAA
AATGGCAAACGTCTCAAGAAGAAGAAAACGAGCATCAAGAAATGCACACTGAATCCATAT
TACAACGAGTCATTTACTTTTGAAGTACCATTCGAACAAATACAGAAGGTGAATTTAGTC
GTAACTGTGGTGGACTACGATCGCATCGGCACATCTGAACCGATTGGTAAGGTTGTGCTG
GGATACAACGCGTCAGGAACCGAGCTTCGTCATTGGTCCGACATGCTGGCCAGCCCGCGT
CGCCCAATCGCGCAATGGCACACGCTCAAAGATCCCGAAGATGGAGAAAAGAAGGATTAA
Protein sequence:
MSPVLSTQLRWRRDAEVTSEKPASNGTTPSPMPPPATTTQESIVEKTAEIAHKMNMETWQ
LVAILVGVAVVVLGICFCCIRRCFRKRRSKDGKKGMKGVDFKSVQLLGSAYKEKVQPDME
ELTENAEEPDDGEEKKEEQKLGKLQYKLEYDFNSNSLSVTVIQAEELPALDMGGTSDPYV
KVYLLPDKKKKFETKVHRKTLNPVFNETFVFKSVPYADAMNKTLVFAIFDFDRFSKHDQI
GEVKVPLCQVDLAQTIEEWRELQSVEGEGGQDNKLGDICFSLRYVPTAGKLTVVILEAKN
LKKMDVGGLSDPYVKIALMQNGKRLKKKKTSIKKCTLNPYYNESFTFEVPFEQIQKVNLV
VTVVDYDRIGTSEPIGKVVLGYNASGTELRHWSDMLASPRRPIAQWHTLKDPEDGEKKD