| New model in OGS2.0 | DPOGS205800 |
|---|---|
| Genomic Position | scaffold143:- 58829-60488 |
| See gene structure | |
| CDS Length | 843 |
| Paired RNAseq reads | 778 |
| Single RNAseq reads | 2051 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010366 (1e-102) |
| Best Drosophila hit | alicorn (9e-85) |
| Best Human hit | 5'-AMP-activated protein kinase subunit beta-1 (2e-67) |
| Best NR hit (blastp) | AMP-activated protein kinase beta subunit [Bombyx mori] (2e-138) |
| Best NR hit (blastx) | AMP-activated protein kinase beta subunit [Bombyx mori] (6e-136) |
| GeneOntology terms | GO:0004679 AMP-activated protein kinase activity GO:0035090 maintenance of apical/basal cell polarity GO:0070050 neuron homeostasis GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR006828 5-AMP-activated protein kinase, beta subunit, interaction domain |
| Orthology group | MCL11877 |
Nucleotide sequence:
ATGGGCAATGCGGGGAGTAATCAACAAAAGGAATGGCATAAAGATCAAGCCACAAAGCAT
ACTGACATAGGTTCATCTTCTCCTGCAAAAGAAGGTGAAGCTTTTACGTTTGATAAGAAA
ATCGACGACGATCGTACCTGCCGAGACGATGACAACAACATAGAAGACGGGGCTCCGTAT
TATACCAAAGCTGTACCTGAACACGATGTAGAGGAATCTGTCATACGCGAGAGATCCAAC
TCATTTACTGATGGAATTAAAATTGAGGATGTTAAAGTATTACCAACAGTATTCAAATGG
GAAGGAGGGGGAAAACAAGTGTTTATTAGCGGTACATTTACGGACTGGAAAACTATTCCA
ATGGTGAAATCTCATGGTGATTTTGTTACCATTATTGATTTGCCTGAGGGCGAACATCAA
TATAAGTATTTTGTTGATGGAGAATGGCGTCATGATCCAACTGTAAAACTTGTAGACAAT
GGTATGGGTTCCAAGAATAATTTGGTAACTGTTAAAATGTCAGATTTTGAAGTCTTCCAA
GCCCTTGCAAAAGATAGTGAGGGAATTCATAGTAGCGCACAAACTGAATATTCACAGGAA
ATACCACAATCAAAGCCTTGGGAAAAGGTCTCCGGGCCACCTATTTTACCTCCGCATCTT
TTACAAGTTATTCTAAATAAAGATACACCATTATCTTGTGAACCTACTTTATTGCCTGAA
CCAAATCATGTGATGTTGAATCATTTGTATGCATTATCTATAAAGGATGGTGTTATGGTT
TTATCAGCAACACATCGTTATAGGAAGAAGTATGTTACGACATTGCTTTACAAACCAATT
TAA
Protein sequence:
MGNAGSNQQKEWHKDQATKHTDIGSSSPAKEGEAFTFDKKIDDDRTCRDDDNNIEDGAPY
YTKAVPEHDVEESVIRERSNSFTDGIKIEDVKVLPTVFKWEGGGKQVFISGTFTDWKTIP
MVKSHGDFVTIIDLPEGEHQYKYFVDGEWRHDPTVKLVDNGMGSKNNLVTVKMSDFEVFQ
ALAKDSEGIHSSAQTEYSQEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPE
PNHVMLNHLYALSIKDGVMVLSATHRYRKKYVTTLLYKPI