| New model in OGS2.0 | DPOGS205801 |
|---|---|
| Genomic Position | scaffold143:- 51036-53252 |
| See gene structure | |
| CDS Length | 2040 |
| Paired RNAseq reads | 853 |
| Single RNAseq reads | 2064 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG4552 (0.0) |
| Best Human hit | TBC1 domain family member 23 isoform 2 (8e-126) |
| Best NR hit (blastp) | PREDICTED: similar to CG4552 CG4552-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG4552 CG4552-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005622 intracellular GO:0005097 Rab GTPase activator activity GO:0032313 regulation of Rab GTPase activity GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR000195 Rab-GAP/TBC domain IPR001763 Rhodanese-like |
| Orthology group | MCL15399 |
Nucleotide sequence:
ATGACTCTTGAAGAAGACGACAGTACTTGGCTTATAGAATTGGAGTCAGCACTGCTCGAT
GGATGCACCCCTTGTGAGATTAATCTCATCACAAAAGGTAAAAGAATTCCTGAAAATTTA
AGACCTGATGTTTGGTTGGTTTGTCTCAATTGTCAAGAAATGGGAAATCAGCTGCTTCTT
TTCGATGAAGTATTTGATTTACCAAATCAAAACGATTTGAGGGATGATGTAAAAAAATTT
GTTCAAAAACTTGACAATGATGACGATGAAAAGTTATCAGTAATATCAGACATAGAATCT
ATCATAACATTCTATTGCAAGTCAAAATCACATAGTTACGCTTCTAACAATGGCTGGATT
GAGATACTGTTTCCACTGTTAAGTCTGAAATTACCTAGAGGTGACACATATAATTTGTTT
GAAAAAGTAATAAAGCTATATATTCCTAACGGCTGTGTATCTAATGGTGTGCCTTTTCAC
ATACTACGACTGATCATACAATACCATGATCCAGAGCTGTGTTCATTCTTGGATACTAAA
AGAATAACACCCGAACAGTATTGCATGCCTTGGCTTAGATCCCTTTTTTCTGGTACATGC
AGTTTGGAGGTGGTGCTTTTTATGTGGGACTTGTATTTTCAGAGATCAGATCCTTTCTTT
ATATTCTTCTTATGCCTTATCATGATTATTAATGCTAGAGAGCAACTGCTACAAATGAAG
AATGAAGATAAATCTACTATAATTAAAGTTCTGAGTAGCATGCCCCGGGATCTCGAAGCA
AATGATATATCAGATTTTTGTTCCTTGGCCCATTACTATTCACTTAAAACGCCAGTGTCT
TTTCGTGAGGATGTGATTGATGTACTGTATTCCAATAGTGGAGTGGAAATTAATTCTAAA
TTATATTCTCAAGCTCTGTGTCTTCCTGTAGCAGTTCATGAATTGATCGAAACTGCTACC
GTAGATGTGGCAGATGCTGATACCGTTAAGTTCTTTTTGGTTGACTGTCGACCTGCTGAA
CAGTATAATGCTGGTCACTTGTCTACCGCCTTTCACCTTGATTGCAATTTAATGCTTCAG
GAGCCAAATTCATTTAACACTGCTGTCCAAGGTCTATTAAACGCTCAGCAGCAGGCATTA
GCAGCAGGTTCCCTTGCTGCTGGTGAACATTTATGCTTTGTTAGTTCTGGAAGAACAGAA
GAAGACAGCTATGCGCATATGGTAGTAGCGTCATTCCTTAAGAAAAATACCAAGCACGTG
TCTATGTTAGATGGTGGATTTGTTGCTATACACGACTATTTTGGTCCCCATATGACTGAT
TGTTTGGAAGATCACAACACAACTATGTGCTTGGTCTGTGCTCCTAATAATAATAATAAT
GCTAACAAACCAGCTGAGAATAGACCTAGAGACAATGCGCCAGCCATTCAGTTGTTTAGC
AAATTATCATCAGCTATGAAAGCAAAAAGTCAAGAAGTTAAGGGAAAGCTGATAGAGTAT
ATTGTTAATCCAACTTCGCAATCTAATAACGGTGATTGGCACGTGTCAGCGAATGATAGA
AAGGAACAGAGGTATAGGAATGTGCCCCCAGTATTCAGCATCAACGATGAGGACGAAGAT
TCCTATTCCGATAATCGTCGAGACGTATCTAATAGCGATACTTTAGACGAAATGGTAGAC
ATAAAGAATTTCCTGCAAGGCCCGAATATTGTAAATAATTTCACCTGTCAAGAAGTATTG
TCGAATGGTTACATGTTTGACTCTCATCTGGTGGTGACCGAGACACATTTAATAATATTA
CGTGAGATCCCAAACAAGAAAGGCGTAGCCAAAATACTGTCTCGAAGGCCGCTGTCTACT
ATTGTAAAGATTACAGCCAAAAAAAGGCATCCAGAGCTAATTACTTTCAAGTACGGTGTA
CCTGATGGGGACAATTTACTGATCAAAGATATGGATCGATTTCTCATACCCAATGCAGCT
GTTGCCACAAAAATTGTCTCCAATCAAATCGTCTCGCAGTTGGATAATAAGTTACAATAG
Protein sequence:
MTLEEDDSTWLIELESALLDGCTPCEINLITKGKRIPENLRPDVWLVCLNCQEMGNQLLL
FDEVFDLPNQNDLRDDVKKFVQKLDNDDDEKLSVISDIESIITFYCKSKSHSYASNNGWI
EILFPLLSLKLPRGDTYNLFEKVIKLYIPNGCVSNGVPFHILRLIIQYHDPELCSFLDTK
RITPEQYCMPWLRSLFSGTCSLEVVLFMWDLYFQRSDPFFIFFLCLIMIINAREQLLQMK
NEDKSTIIKVLSSMPRDLEANDISDFCSLAHYYSLKTPVSFREDVIDVLYSNSGVEINSK
LYSQALCLPVAVHELIETATVDVADADTVKFFLVDCRPAEQYNAGHLSTAFHLDCNLMLQ
EPNSFNTAVQGLLNAQQQALAAGSLAAGEHLCFVSSGRTEEDSYAHMVVASFLKKNTKHV
SMLDGGFVAIHDYFGPHMTDCLEDHNTTMCLVCAPNNNNNANKPAENRPRDNAPAIQLFS
KLSSAMKAKSQEVKGKLIEYIVNPTSQSNNGDWHVSANDRKEQRYRNVPPVFSINDEDED
SYSDNRRDVSNSDTLDEMVDIKNFLQGPNIVNNFTCQEVLSNGYMFDSHLVVTETHLIIL
REIPNKKGVAKILSRRPLSTIVKITAKKRHPELITFKYGVPDGDNLLIKDMDRFLIPNAA
VATKIVSNQIVSQLDNKLQ