| New model in OGS2.0 | DPOGS206355 |
|---|---|
| Genomic Position | scaffold2239:- 16871-19819 |
| See gene structure | |
| CDS Length | 1257 |
| Paired RNAseq reads | 949 |
| Single RNAseq reads | 2385 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014111 (4e-180) |
| Best Drosophila hit | small optic lobes, isoform D (4e-11) |
| Best Human hit | calpain-7 (4e-115) |
| Best NR hit (blastp) | calpain [Aedes aegypti] (1e-157) |
| Best NR hit (blastx) | PREDICTED: similar to calpain [Tribolium castaneum] (6e-159) |
| GeneOntology terms | GO:0008234 cysteine-type peptidase activity GO:0008233 peptidase activity GO:0005634 nucleus GO:0006508 proteolysis GO:0005622 intracellular GO:0004198 calcium-dependent cysteine-type endopeptidase activity |
| InterPro families | IPR001300 Peptidase C2, calpain, catalytic domain IPR022682 Peptidase C2, calpain, large subunit, domain III IPR022683 Peptidase C2, calpain, domain III |
| Orthology group | MCL16651 |
Nucleotide sequence:
AACATCGACCTCCACGCGCTAACCGGTTGGATCCCGGAGCGGTGCGCGATCCGGTCCGAG
GCGGACTTCAACGCGGATGGTTTGTATGAGATAGTGCGGGCGAGGCTGGAGGCGGGACAC
GTGCTGGCCAGCGTCGCCACCGGGGACCTGTCCGACGACGACGCCGAGCGGACCGGCCTC
GTCGCGTCGCACGCTTACGCCGTGCTCGACGTGCGGCTGGTCAATGGCGTAAAGCTTCTG
AAGCTCAAGAACCCGTGGTCTCACCTCCGCTGGCGAGGCAACTACAGCGAGCTGGACACT
GTCCACTGGTCGCCGAACCTCTGCTCCGCACTGGACTACGACCCGGACAGCGCCGCTCAG
TACGACAACGGAGTGTTCTGGATAGATTACGCGAGTATACTGAAGTTCTTTGATGTTTTT
TATCTCAATTGGAACCCAGAGCTGTTTAAGTTCACTTATTGCATACATCAGAAATGGGAA
GCCGGTAACGGTCCTATTAAAGACGCGTATACGATATCAGAGAATCCTCAGTACTCTTTG
AAGGTGAACGGCACTGGCGCCGTCTGGTTGTTACTGACGAGACACATCACTAAGATAGAA
GACTTCAGGAACAACCAGGAGTACATAACACTACTCGTTTATAAGAACGGGAAGCGAGTA
TACTATCCACACGACCCACCTCCTTATATAGACGGAATACGTATCAACAGTCCCCACTAC
CTCGTGAAGATAATAGTGGGGGAGAACAGTTCGGACAAATACACACTGGTCGTGTCCCAG
TATGAGAAGACTCGCACCATATACTACACGCTGAGGGCCTACGCCACGTGTCCGTTCGCA
TTGGCAAAGCTGGACCCATATCCCTATACCAAAACTATCAGAGGTGAATGGTCGGGCAGA
ACAGCCGGCGGTTGTGAAAATCACAGACAAACTTATCAGAATAACCCAAAATATATAATA
ACGGTCCCAGAAAGCAGGAACCCGTGCCACGTCACCATAGAACTGAAAGGTCCCAAAGAA
TACCAGATAGGAGTAGACGCGAGGGTTGAATCCTTGGACGATCCAAATATAACCGCGCCG
TTCTTGAGGGAATCCTCAGGAGCGTACAGATCTGGTTTCGTTGTGCTGGAGTTAAATAAT
TTACCAGGCGGACGGTATCTGCTCACACCATCTACCTTCTATCCGGGACAGGAAGGGCCA
TTTTTCCTTGAACTGAGATCTACTTGCAGCATCACAGCCGAGAGGAAGAATGAATGA
Protein sequence:
NIDLHALTGWIPERCAIRSEADFNADGLYEIVRARLEAGHVLASVATGDLSDDDAERTGL
VASHAYAVLDVRLVNGVKLLKLKNPWSHLRWRGNYSELDTVHWSPNLCSALDYDPDSAAQ
YDNGVFWIDYASILKFFDVFYLNWNPELFKFTYCIHQKWEAGNGPIKDAYTISENPQYSL
KVNGTGAVWLLLTRHITKIEDFRNNQEYITLLVYKNGKRVYYPHDPPPYIDGIRINSPHY
LVKIIVGENSSDKYTLVVSQYEKTRTIYYTLRAYATCPFALAKLDPYPYTKTIRGEWSGR
TAGGCENHRQTYQNNPKYIITVPESRNPCHVTIELKGPKEYQIGVDARVESLDDPNITAP
FLRESSGAYRSGFVVLELNNLPGGRYLLTPSTFYPGQEGPFFLELRSTCSITAERKNE