| New model in OGS2.0 | DPOGS213629 |
|---|---|
| Genomic Position | scaffold5925:- 2508-8158 |
| See gene structure | |
| CDS Length | 3234 |
| Paired RNAseq reads | 334 |
| Single RNAseq reads | 811 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011691 (0.0) |
| Best Drosophila hit | NMDA receptor 2, isoform C (0.0) |
| Best Human hit | glutamate [NMDA] receptor subunit epsilon-2 precursor (4e-109) |
| Best NR hit (blastp) | PREDICTED: similar to glutamate receptor, ionotropic, n-methyl d-aspartate epsilon (nmda epsilon) [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to glutamate receptor, ionotropic, n-methyl d-aspartate epsilon (nmda epsilon) [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0004972 N-methyl-D-aspartate selective glutamate receptor activity GO:0006811 ion transport GO:0005234 extracellular-glutamate-gated ion channel activity GO:0030288 outer membrane-bounded periplasmic space GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity |
| InterPro families | IPR001508 NMDA receptor IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 IPR001828 Extracellular ligand-binding receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding |
| Orthology group | MCL10273 |
Nucleotide sequence:
ATGGCGCTGGCTGCGCTGGGGGCGCTGGCGTGGAGCGAGGCGGAGCGTGGCGCTGGCATC
AAAGTCGGCGGCGGAGTGACGGGTGCTGGTCGCGAGGCAGCCCGGGGGGGCGGAGTACGG
ATCGGTGGCGACGGGCTGCGGCGACCTCGGACCTCTCCCGCCCCACAGGCTCCGCGCGCG
CCGTCTGTTATCACCGCTGCCCTCGTTGTGCCTCACAAGGCCTTCGGTGCACGTGATTAT
ACCAGAGCTGAGAAGGCTGCTCTGTCCAAACTGCCGCGCAAACTTAAACTTTTTTCACAA
GTGCGCCTAAACGTTACGCTTTCGATGCAAGGCCTTACGCCTAGTCCCATGTCTATCTTG
GACTCGCTATGTAAGGAATTTTTAGCAGTTAACGTATCTGCTATACTTTATCTTATGAAT
CATGAACAATACGGGCGATCTACTGCCTCTGCACAATATTTTCTACAACTCGCCGGATAT
CTTGGCATACCGGTCATTGCATGGAATGCTGACAATAGCGGTCTTGAAAAGCATGCGTCT
CACGCGTCACTGCGGTTGCAATTAGCGCCCACTATCGAACACCAGACGGCCGCTATGCTC
TCTATACTAGAGAGATACAAATGGCATCAGTTTAGTGTCGTCACATCAGCTATTGCTGGT
CACGACGACTTCATACAAGCCGTGCGGGAGAGAGTCTCGGCTCTTCAAGACCGCTTTAAA
TTTACGATCCTCAATGCTGTGGTTGTGAAAAAACCAGCAGATTTAAACGAGCTGGTAACG
AGTGAAGCGCGCGTGATGTTGTTGTACGCGACACGGGAGGAAGCGGCTGACATACTATCT
TCAGCTGGTGATCTTCACCTCACTGGAGAAAATTTCGTTTGGATTGTGACGCAAAGTGTG
CTGGGCTCTATGCAACAGCCAAACAAATTTCCTGTTGGCATGCTAGGTGTACACTTCGAC
ACATCGAGCTCGTCAATTATATCTGAGATTGCGACCGCTGTCAAAGTTTTCGCTTACGGT
GTGGAGTCCTACGTGTCTGAACCGGAAAACATTAGATATCCTCTGGGAACTAGGTTGTCT
TGTAGCGGAGTGGGCACGGGTGAAGCGCGCTGGTCTACTGGTGAAAGATTTTATCGGCAT
CTACGTAATGTCAGCGTGGAGGGAGAGTCGGGAAGACCGAGTATAGAATTTACTCCAGAT
GGCGAACTTCGGGCTGCTGAGTTAAAAATAATGAACTTAAGACCAACTCTCGGTGAACAG
CTTGTTTGGGAAGAAATCGGAACTTGGAATTCATATCCCAAGGAACGGTTGGTAATTAAG
GACATTGTTTGGCCTGGTGGGTTACACACTCCACCACAGGGTGTACCAGAAAAGTTCCAT
ATGCGTATAACGTTTCTAGAGGAACCGCCTTACATTAATCTAGCACCACCGGACCCCGTC
AGTGGGAGATGCTCTTTAGATCGTGGAGTCATTTGTAGGGTCGCACCAGAGATTGAAGTA
GCAGGACTAGAAGCGGGGACGGCGCACAGAAACAGTTCGCTGTATCAATGTTGTAGTGGA
TTTTGCATAGATTTACTTCAACAGTTAGCGGAACATCTCGGATTCACTTACGAACTCGTT
CGGGTAGAGGACGGCCGCTGGGGTACCTTACACCATGGAAAATGGAACGGCTTGATTGCG
GAACTTGTAAACAAAAAAACTGACATGGTTTTAACATCATTGATAATCAATTCAGACCGA
GAAGCTGTTGTAGATTTTAGTGTGCCGTTCATGGAAACTGGTGTGGCCATAGTGGTTGCT
AAACGAACTGGAATTATTTCACCCACCGCATTCCTTGAACCATTCGATACAGCTTCTTGG
ATGCTGGTCGGAGCGGTTGCCATTCAAGCCGCCACATTTTCTATATTTTTTTTCGAATGG
CTATCGCCTAGCGGTTTTGATTGCTCAACGGGAACTAATTCCAAACGAATTCCACAGAAC
AGATTTTCTCTGTGTCGGACTTACTGGATCGTGTGGGCGGTGTTGTTTCAGGCATCAGTC
CACGTGGACTCGCCGAGAGGATTCACTGCGCGGTTTATGACGAATATGTGGGCGATGTTC
GCGGTGGTGTTCCTAGCTATATACACGGCCAACCTGGCCGCGTTCATGATCACCCGGGAA
GAATTCCATGAGCTGAGCGGGCTGGACGACCCGCGCATCGCCCGCCCTCTCACTCAACGA
CCCGCACTCAAGTTCGGGACAGTACCGTGGTCCCATACCGACGCTACGCTCGCGAAATAC
TTTCCCGAGCCCCACGCTTATATGGCTTCATACAATAGAAGTACTGTGAGTGCCGGTGTG
ACCAGCGTCCTGACGGGGGATCTCGATGCGTTTATCTATGATGGCACAGTGTTGGATTAT
CTCGTCTCCCAAGATGAGGACTGCCGATTATTAACCGTAGGCTCGTGGTACGCGATGTCG
GGTTATGGATTGGCATTCACCAGAAATTCTAAATATCTAAGCATGTTTAATAAAAGATTA
CTCGATCTACGCTCCAATGGAGACCTAGAGCGGTTACGAAGATACTGGATGACGGGGACG
TGTAAGCCAAACAAGCAAGAGCACAAATCATCTGACCCACTGGCGTTGGAGCAGTTCCTC
TCCGCGTTCCTGCTGTTGATGGCGGGCATTCTGTTGGCAGCACTACTGCTGCTGCTGGAA
CACGTATACTTCAGATACATGAGGGAACACCTGGCTGCGTCTAGCGCCAGTGCGTGCTGC
GCTCTCGTGTCATTATCAATGGGACAATCATTAACCTTCCACGGGGCAGTAGTTGAAGCG
GCAGCACGGGGCTTCGGTCCCGGGAAGCGTGGACACTGCCGTTCCGCCGTATGCGCTGCA
CAGGTGTGGCGAGCTCGTCACGAACGTGACGCGGCGGTGGCTCGTGCTCGTCAGCTGGCG
GCGGCACTGGCGGCTCACGGGCTGCAGCCGCCTCCTCGGCGCCTGGCCTCGGCCGCCGCG
CTGCTCGCCGCCGGACGAGCTCATGACGCGACTCGGCCGCGGACTCTACACGCTCCCGCC
GATTTGTTGCCCGACCTCGAGCGACCGCTCTCCTGCGGCGATCTGCGCGCCAGAGAGATG
GACGTAGATAGCGAAGTTGTTGTGGGAAGCGCGCGCGGGGCGGGCTGGGCGCCGGGCGCG
CCTCCTCGTGTTGTCTACTACAATAAAATATATTTTTTGGACAATACAGTGTAG
Protein sequence:
MALAALGALAWSEAERGAGIKVGGGVTGAGREAARGGGVRIGGDGLRRPRTSPAPQAPRA
PSVITAALVVPHKAFGARDYTRAEKAALSKLPRKLKLFSQVRLNVTLSMQGLTPSPMSIL
DSLCKEFLAVNVSAILYLMNHEQYGRSTASAQYFLQLAGYLGIPVIAWNADNSGLEKHAS
HASLRLQLAPTIEHQTAAMLSILERYKWHQFSVVTSAIAGHDDFIQAVRERVSALQDRFK
FTILNAVVVKKPADLNELVTSEARVMLLYATREEAADILSSAGDLHLTGENFVWIVTQSV
LGSMQQPNKFPVGMLGVHFDTSSSSIISEIATAVKVFAYGVESYVSEPENIRYPLGTRLS
CSGVGTGEARWSTGERFYRHLRNVSVEGESGRPSIEFTPDGELRAAELKIMNLRPTLGEQ
LVWEEIGTWNSYPKERLVIKDIVWPGGLHTPPQGVPEKFHMRITFLEEPPYINLAPPDPV
SGRCSLDRGVICRVAPEIEVAGLEAGTAHRNSSLYQCCSGFCIDLLQQLAEHLGFTYELV
RVEDGRWGTLHHGKWNGLIAELVNKKTDMVLTSLIINSDREAVVDFSVPFMETGVAIVVA
KRTGIISPTAFLEPFDTASWMLVGAVAIQAATFSIFFFEWLSPSGFDCSTGTNSKRIPQN
RFSLCRTYWIVWAVLFQASVHVDSPRGFTARFMTNMWAMFAVVFLAIYTANLAAFMITRE
EFHELSGLDDPRIARPLTQRPALKFGTVPWSHTDATLAKYFPEPHAYMASYNRSTVSAGV
TSVLTGDLDAFIYDGTVLDYLVSQDEDCRLLTVGSWYAMSGYGLAFTRNSKYLSMFNKRL
LDLRSNGDLERLRRYWMTGTCKPNKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLE
HVYFRYMREHLAASSASACCALVSLSMGQSLTFHGAVVEAAARGFGPGKRGHCRSAVCAA
QVWRARHERDAAVARARQLAAALAAHGLQPPPRRLASAAALLAAGRAHDATRPRTLHAPA
DLLPDLERPLSCGDLRAREMDVDSEVVVGSARGAGWAPGAPPRVVYYNKIYFLDNTV