| Genomic Position | scaffold11397:+ 1432-4609 |
|---|---|
| See gene structure | |
| CDS Length | 1482 |
| Paired RNAseq reads | 202 |
| Single RNAseq reads | 643 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002904 (9e-47) |
| Best Drosophila hit | BBS1 (1e-09) |
| Best Human hit | Bardet-Biedl syndrome 1 protein (1e-17) |
| Best NR hit (blastp) | polyprotein [Tetraodon nigroviridis] (4e-30) |
| Best NR hit (blastx) | polyprotein [Tetraodon nigroviridis] (2e-30) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0060026 convergent extension GO:0070121 Kupffer's vesicle development GO:0060027 convergent extension involved in gastrulation GO:0033339 pectoral fin development GO:0007368 determination of left/right symmetry GO:0032402 melanosome transport GO:0042384 cilium assembly |
| InterPro families | ND |
| Orthology group | MCL10002 |
Nucleotide sequence:
ATGATAGGAGCACAAACTAACAGAGTAGGGTTAGGATCAAGTAAGAAGGTCCAAGATACG
GATATGTTGAAGTCTTTTATTTGGCAAGACGAGAATGATAAATATAAGATCCATGCAATA
AGTTTAGAAATGCAAAACGAGTGGTTAGACATAGGAGATTTTTGCATCCCATTAGCACTA
AAATGGCGCACCTTAATCCATGATTGGTCGCCAGCATTGCTAAAATTCTATCTCAATGCA
TTCCAGATGACTCTCCCAGATCAGAGTAATTTAGTAAGATGGGGTAAAGGTACCGAAAAG
ACTTGCTATATCTGTGGGAAGGCAGTTGGAACTGCTAGGCACTTGTTAGTGGGATGTAAG
GTACTCCTCGATAGCGGTCAATACTCGCGTCGTCACGATAGGGTTCTAGAAATCATACGT
GAAGCGGTTAGTCTTTCGGTAGCCAGAGCGCAAAAAGGAATAACCACAAACGAGCGATCA
GTAGGTTTTGTGAGAGAGGGCACTAGGGCTATAAAAACAAATGTTAAGCCTTACTCCATC
CTTAAAGCGGCTACGGATTGGACTATAATGATGGATACGTGTGAAAAACAATACAAAATC
CCCGAGGATATTTGTGCGTCGGCCTCCAGACCGGACATATTCATGTATTCGCGAATCTTA
AAGCGCGTTGTGATGATAGAGCTTACGGTTCCTTGGGAAACCAACATCCCCAAAGACCAT
ACCATCAAGGTCAACAAATATTACGAGCTCACAAACGAACTCACTCGAAATAGGTTCGTC
GTGGATTTATACGCGGTAGAAGTGGGAGCGAGAGGTATAACGGCTAAATCTCTCTACAAC
CTACTAAAAGACTTAGGCCTGTCCAGAACTCACATCAATTCGTTCTTGGAACGTACTTCG
AAGGCAGCCCTAGTAGGTTCTTTTCAAATATGGTTAGGTAGGGAGAGGAGCTTGGACAGT
GGAGCTATGCATGAGGCGTTCCAGTATGAATTGAACCGTCTACGTTTATTAACGGCTCAG
ACCCTCTTGGAGGCGTATAGGAAGTCGGATAACTTCGTTGGAACCGGCAATATGGAACCC
ATAAGATTATCCGCCGAGGTGGAAGGACTAGGTCCCGTGTTTGTGGTGACCTTGATAGTA
CACAACACGTGCTCCGAGCGCGCCGTCTCCGGCCTCGCCGTGTTGTTCCACGTCATCTCC
ACTGGATACAGAGTCCATACACCATATACCAAGGTTCCACTGATCGCACCGGGAAATCAG
TTGAAATTTCCAATTAAAGTTGAGGAAATATTCAGTGAGAACGTGAACCCGGATGTATTT
TTTCGTAATGTGACGGGTCAGGCGGGGGAGGGGTCAGTCATTAAAGTGTTGCTTTTGAAG
GAGGGAAAAGTAAGCCCAGTTCTCGCAGCGAGACTGGTGGCAACAAGTCAATGTAAAAAA
CCACCCGATTTTTATATTCATTCCGCCAATGTCCTAATATAA
Protein sequence:
MIGAQTNRVGLGSSKKVQDTDMLKSFIWQDENDKYKIHAISLEMQNEWLDIGDFCIPLAL
KWRTLIHDWSPALLKFYLNAFQMTLPDQSNLVRWGKGTEKTCYICGKAVGTARHLLVGCK
VLLDSGQYSRRHDRVLEIIREAVSLSVARAQKGITTNERSVGFVREGTRAIKTNVKPYSI
LKAATDWTIMMDTCEKQYKIPEDICASASRPDIFMYSRILKRVVMIELTVPWETNIPKDH
TIKVNKYYELTNELTRNRFVVDLYAVEVGARGITAKSLYNLLKDLGLSRTHINSFLERTS
KAALVGSFQIWLGRERSLDSGAMHEAFQYELNRLRLLTAQTLLEAYRKSDNFVGTGNMEP
IRLSAEVEGLGPVFVVTLIVHNTCSERAVSGLAVLFHVISTGYRVHTPYTKVPLIAPGNQ
LKFPIKVEEIFSENVNPDVFFRNVTGQAGEGSVIKVLLLKEGKVSPVLAARLVATSQCKK
PPDFYIHSANVLI