| New model in OGS2.0 | DPOGS205702 |
|---|---|
| Genomic Position | scaffold1398:- 24229-29103 |
| See gene structure | |
| CDS Length | 1770 |
| Paired RNAseq reads | 1089 |
| Single RNAseq reads | 2656 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009915 (3e-130) |
| Best Drosophila hit | CG4030 (4e-32) |
| Best Human hit | lateral signaling target protein 2 homolog isoform 2 (2e-10) |
| Best NR hit (blastp) | PREDICTED: similar to CG4030-PA [Apis mellifera] (4e-81) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP000407-PA [Tribolium castaneum] (3e-74) |
| GeneOntology terms | GO:0017137 Rab GTPase binding GO:0008270 zinc ion binding |
| InterPro families | IPR001841 Zinc finger, RING-type IPR017455 Zinc finger, FYVE-related IPR000306 Zinc finger, FYVE-type IPR011011 Zinc finger, FYVE/PHD-type IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL14068 |
Nucleotide sequence:
ATGGATGAAAAAACGAAAATGGCTAGCGGTTCCGCAGTTTTGAAAGAAAGCGGAGAAGAA
GGTGCTAAAGGTCCTCAGAACGCTAAGCGAGATCTGGAAGAGGAGTTTAACGTGCAAAGA
GCTAAAATGAAAGAGTTATTCTTACAGAAAGAAGAGGATCTCCGTCAACTGGTGCTAGAG
AAGCAGCAACTGGACTCTGAGGTGTTGGGGCTACGGGAGGAGCTGCAACAACTGCAAACA
CTCAGTGAGAACCAGAAGTCAGAGATACAGAGCTTACAGATGTTAGTCAGTGAGACAGTG
GAGGCATCTTCATCGGGCTCCGAGGAGGTGAGGAGGCTCCGAGCTCGGAACGTCGACTTG
GAACAACAGCTCGCACAACTTAGACAACAACAGGAGCTTCCCCTGGCGCCCGCCACCTTC
GTGCGGTCGTTGGCGCGCAAACTGGGAGCGGAGCCGGAGGAGCCACCGCCGCCCAGGAAG
GCCGAGGACGAGCTGCTGCAGAGCATCATACAGCCGCTCGAGCTGGAGATCGGCGCGCTC
AAGAACAAGCTGCGGGAGAACGACGCTCTGCTACAGGATGCTCTGAAATCCAAAGTAGCA
GCTCCCAACACCTCGGGGGCCGTGGCCAGCGGCGGCGACTCTAAACCTGAAACGGAGAGC
CGCGGCTGTGACATGTGCGCCAACTACGAGAGACAACTGGTCGCCGAGCAGACACGCGCA
GACCACGCACGAGATAAAGCGAGGAAATTTGAACTTTCGCTCAAATTGGCCACAGAGGAG
TTAGAGGGCGTCCGCAGCGTCCATGACGAGACGACGCGCGCCTGGCAGGCCGAGAGGACA
GAGGGAGGGGCGCGACTCGCGGACCTGCAGCGGGCCCTCGACCACGCCAAGGAACAGATA
GCACAAAGGAGCGAACAGGCCGACCGGGCCTCGCGACAGGCTCTCCACAACGTGACGGCG
CTCACGGTCGCCAGGGAGACGCTACAGGGGAAGCTGGACGAACTAGAAAGGGAAAATGAG
ATGCTCGTAGGACGATATCTCCGGAAGGCCGCAGAGATGGAGAGCGAGGTCATCGACCTG
CCGGACGACGTGCCCGCGCTGCAGGAGAAGGCGATCCAGCTGCACGAACAGCTGCTCGTC
TGCCAGGTTGGGCGAGAGAGGGCGCTGGAGGACGAGGAGGAACTACGAGCGCAGCTACAG
CAGCACGCCGCCATGTTGCACCGGAGAGAAGACGAGCTGGCCGAGCAGGGAGCCAGGCTC
AAGGACGTCGGCAAAGAGCTGGATCGGCTGCAGACTGAGCACGAGCAGATGACGGAGCTG
GCGGACAAGCTGAGGCAGTCCAACGACACCATCGAGAAGCTGCTCGAGGATAAAAAACGT
CTCCAGAACGAGGTGAGCGAGGTGCGCACGAGGGTGTGCGTGTTACAGCAGGAGCTGGAC
AACAGTGAGAAGGTGCAGCAGGACTTCGTGCGACTGTCGCAGAGCCTGCAGGTCCAGTTG
CAGAGGATACGGGAAGCCGACTCCGAGGTGCGCTGGCAGCACGACGAGGACGTGAGCGAG
TGCCCCGCGTGCCGCACGCCGCTGCCCACCAACAAGAAGAAGATCCACTGCCGCCACTGC
GGCCGCATCTTCTGCGGGCCTTGCGTGAGCCAGGTGGTGGCGAGCGGCCCGCGCGGTCTG
CCAGCGCGCGTGTGCTCCGTGTGTCGCACGTTGCTGCAGCCGCACGCCGCGCCCTACTTC
AGCACCCGCCCGCCCAACTCGCCCGACTAG
Protein sequence:
MDEKTKMASGSAVLKESGEEGAKGPQNAKRDLEEEFNVQRAKMKELFLQKEEDLRQLVLE
KQQLDSEVLGLREELQQLQTLSENQKSEIQSLQMLVSETVEASSSGSEEVRRLRARNVDL
EQQLAQLRQQQELPLAPATFVRSLARKLGAEPEEPPPPRKAEDELLQSIIQPLELEIGAL
KNKLRENDALLQDALKSKVAAPNTSGAVASGGDSKPETESRGCDMCANYERQLVAEQTRA
DHARDKARKFELSLKLATEELEGVRSVHDETTRAWQAERTEGGARLADLQRALDHAKEQI
AQRSEQADRASRQALHNVTALTVARETLQGKLDELERENEMLVGRYLRKAAEMESEVIDL
PDDVPALQEKAIQLHEQLLVCQVGRERALEDEEELRAQLQQHAAMLHRREDELAEQGARL
KDVGKELDRLQTEHEQMTELADKLRQSNDTIEKLLEDKKRLQNEVSEVRTRVCVLQQELD
NSEKVQQDFVRLSQSLQVQLQRIREADSEVRWQHDEDVSECPACRTPLPTNKKKIHCRHC
GRIFCGPCVSQVVASGPRGLPARVCSVCRTLLQPHAAPYFSTRPPNSPD