| New model in OGS2.0 | DPOGS205700 |
|---|---|
| Genomic Position | scaffold1398:+ 14105-22998 |
| See gene structure | |
| CDS Length | 3660 |
| Paired RNAseq reads | 4830 |
| Single RNAseq reads | 11322 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009835 (0.0) |
| Best Drosophila hit | SMC1 (0.0) |
| Best Human hit | structural maintenance of chromosomes protein 1A (0.0) |
| Best NR hit (blastp) | structural maintenance of chromosomes 1A [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to structural maintenance of chromosomes protein 1A [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0003677 DNA binding GO:0008278 cohesin complex GO:0007062 sister chromatid cohesion GO:0005524 ATP binding GO:0005515 protein binding GO:0010629 negative regulation of gene expression GO:0005694 chromosome GO:0048813 dendrite morphogenesis GO:0016319 mushroom body development GO:0016322 neuron remodeling GO:0035327 transcriptionally active chromatin GO:0005634 nucleus GO:0005700 polytene chromosome |
| InterPro families | IPR003395 RecF/RecN/SMC IPR010935 SMCs flexible hinge |
| Orthology group | MCL10832 |
Nucleotide sequence:
ATGCCTGCATTCCTTAAATATATTGATATGGAAAACTTCAAGTCCTATCGCGGACATCAC
CGCATAGGTCCTCTGAAGTCTTTCACCGCCGTCGTAGGCCCAAATGGGTCGGGGAAATCC
AATTTTATGGACGCCGTGAGTTTTGTGATGGGGGAAAAAACATCTTTGTTGCGAGTGAAA
CGTCTCAGTGATTTGATACATGGTGCCTCTATTAACAAACCGGTATCAAGAAGTGCGTCT
GTGACTGCAACCTTTATTTTAGAGGATATGACTGAAAAACAATTTCAAAGGTCTGTAATT
GGACAATCTTCTGATCACAAAATTGATGGGCATTCTGTTCCAATAAGTCAATACCTGATA
GAGCTTGAAAAGCTGGGTATAAATGTGAAGGCCAAGAACTTTTTGGTTTTCCAAGGTGCA
GTAGAGAGTATTGCAATGAAGAACCCTAAGGAAAGAACGGCTTTGTTTGAAGAAATCAGT
GGTTCTGGTGTGCTAAAAGAGCAGTATGAAGCTTGTCGTGCTGAGGTCAACAGGGCCGAC
GAAGAGGCACAGTTCTCATATCAGAAGAAAAAGGGTGTGGCAGCAGAGCGAAAAGAAGCC
AAGTTTGAAAAGGAGGAGGCAGAGAAATACACGAGACTGAAGGAAGAGTTGCAACAACAA
AAAATAGAATTGCAGCTATTCCACCTTTATCATAATGAGAAAGATATCCAAGCAGCTGAA
GAAGAACTGCAGCATAAACAATCAGAACTAGCTAAAGTAGAGAAGAAACGGCAGAAAGCA
GAAGATGCTCTGAAAGAGAAAAAGAAGGAGTCCGGCACAGTGCAGAGGGAGCTGGCAAAG
ATAGAACAGGAGATAAGAGAAGTGGAAGCAGAGATATCAAAGAAACGGCCAACCTTTATC
AAGGCCAAGGAACGTGTGACTCACACGCAAAAGAAACTCGAGAGTGCCCTGAAAACTTTG
GAGCAGGCTCGGAAGGCACACGAGGCTCACCAGGCTGATATAAGGAAACTGGAAGAAGAG
CTCCGTCAGGTGGAAGAAGAGAAAGCAGCATGGGAAGCCACGCTCACCGGCACCAGCACC
AGCAGGGCGGACGTGCATCTGGAGGAGGCTCAGATACGAGAATACGAGGAGCTGAAGATG
GAAGCTTCGAGGCAGGCGGCGCGCTACCTGCAGGAACTAGACTCAGTGAACAGGGAACAG
AAGGCCGACCAGGACCGCCTCGACAACGAGATGAGGAAGAAAGGGGAGGTGGAGAACAAG
CACAGGCAGAAGGGCCACGAAAGAAACGAAGCGATGAAACGTGTGGAGAAACTAAACGAA
CACATTAAGAGCTCGGAGCAGGCGCTCGAGGAACAGAGGAGGCTCAGAGCGGAGCTGCAG
GCAGACGTGGGGTCCTGTCGAGGACGAGCGGCGGCCCTGCAGCAGGCGCTAGAGGAAGTG
GCCTCCCAGCTGGGAGACGCTCGGGTCGACAAACACGAGGAGGCGCGCCGGAGGAAGAAG
CAGGAGATCGTGGAGAGCTTCAAGCGAGAGATACCTGGAGTGTACGACCGGATGATAAAC
ATGTGCCAGCCGACCCACAAGCGATACAACGTGGCCATCACCAAGGTGCTGGGCAAGTAC
ATGGAGGCCATCGTGGTGGACACGGAGAAGACGGCACGCCGCTGCATACAGGTGCTGAAG
GAACGCATGCTGGAGCCCGAGACCTTCCTGCCGCTCGACTACATACAAGCCAAGCCGCTC
CGGGAGAGGCTACGAGACATCAAGGAGCCCAAGAACGTGAAGCTGTTGTTCGACGTGCTG
CGCTTCGAGCCGGCCGCCATCCACCGCGCCGTGCTGTTCGTCACCAACAACGCGCTGGTC
TGCGAGACGCCCGAGGACGCGTCGCGGGTCGCCTACGACCTCGACCGCACCAAGAACAGC
AGATACGATGCGCTGGCGCTGGACGGAACCTTCTACCAGAAGTCCGGCATCATCTCCGGT
GGCTCTCTGGACCTGGCGCGCAAGGCCAAGCGCTGGGACGAGAAACATCTCTCACAGCTC
AAGGCTAAAAAGGAGAAACTGACGGAGGAGCTGCGGGAGTCCATGAAAAAGTCGCGCAAG
GAGTCCGAGCTGACCACCGTGGACTCGCAGATCCGGGGCCTGGAGAGTCGCCTGAAGTAC
GCGCTCACCGACAGGGACACCACGCTGAAACAAATCAAATCCTTCGACGCCGAGATCGAA
GAACTGGAGCGGAAAATAGAGATGTTTGGGCCCCAAGTGGAGGAGATCGAGCGAACGATA
CGAGCGCGGGACGCCAAGATACAGGAGGTCAAGGAAAATATGAACAACGTGGAGGACGTC
GTGTTCAGGGCTTTCTGTAGAGACATCGGCGTGGCCAACATACGGCAGTACGAAGAACGG
GAGCTGCGCGCGCAGCAGGAGAGAGCCAAGAAAAGGATGGAGTACGAGGCGCACATCGAC
CGGATAGGATCCAACTTGGAATTTGAACGGTCGCGGGACACGCAGAAAAACGTGACGAGG
TGGGAGAGGACGGTACAGGACGGCGAGGACGAGCTGGAGGTCAGCAGGCAGGCGGAGGCC
AAGCAGCGGGCGGACGTGGACCGCGAGCTGCGCCGCGCGGAGGAGCTCAAGGCGGAGCGG
GCTGCGGCCAGGGCGGCCCTGGAGAAGGCGGACGACGCCGCCGCCGGCGCCAGGAGGGAC
CTCGCCGCCGTCAACAAGGACATACAGACCCTGCAGAAACACGTGGCCGCGGTCGAGGCG
CGCATCGAGAGCAAGCGGAGCGACCGACACAACATACTCAGGCAGTGCAAGATCGACGAC
ATCCAGGTGCCGCTGGTTGAAGGCTCGCTGGACGACACGGCCGAGGAGTCCGAGCCCTCA
TCCATGTCCACCACGCAGCAGCATCTCAGGGACTCCAGAATCCGTGTGGACTACCGCATG
CTGGGTGAGTCCCTCCGCGAGCTGGACGAGCCGGACGAGGTTAAGCGGCGCGGGGACAAG
CTGCTGAAGGCCATCAACTCCCTGCAGAACACCGTCGACAAAATACAGGCGCCCAACATG
AGGGCGATGCAGAAACTTAATGAGGTGCGAGAAAAAGTGAACGCTACCAATGAGGCTTTC
TTAGCGGCTAGGAAACGAGCGCACAAAGCGAAACTAGCCTTCGAAAAGGTGAAGAAGGAG
CGGTACGACAAGTTCATGAACTGCTTCGAACACGTCGCCAATGAGATCGACGCCATATAC
AAGGCGCTGGCCATGAACCAGTCGGCGCAGGCGTTCCTGGGTCCAGAGAATCCCGAGGAG
CCCTACCTGGACGGAGTCAACTATAACTGCGTAGCGCCGGGCAAACGGTTCCAGCCCATG
TCCAACCTGTCAGGAGGGGAGAAGACGGTGGCTGCGCTCGCGCTGCTCTTCGCCATACAC
AGCTACCAGCCCGCCCCATTCTTCCTGCTGGACGAGATCGACGCGGCCCTGGACAACACC
AACATTGGGAAAGTGGCTTCCTTCATCCGGTCCAAGAAGGGCTCCCTGCAGACCATCGTC
ATCTCGCTCAAGGAGGAGTTCTACGGATGCGCGGACGCACTCGTCGGCATCTGCTCCGAG
CCCGCGGATTGCCTCGTCAGTGACGTCATCACCCTCAGCCTCGAGAGCTACAACGACTAA
Protein sequence:
MPAFLKYIDMENFKSYRGHHRIGPLKSFTAVVGPNGSGKSNFMDAVSFVMGEKTSLLRVK
RLSDLIHGASINKPVSRSASVTATFILEDMTEKQFQRSVIGQSSDHKIDGHSVPISQYLI
ELEKLGINVKAKNFLVFQGAVESIAMKNPKERTALFEEISGSGVLKEQYEACRAEVNRAD
EEAQFSYQKKKGVAAERKEAKFEKEEAEKYTRLKEELQQQKIELQLFHLYHNEKDIQAAE
EELQHKQSELAKVEKKRQKAEDALKEKKKESGTVQRELAKIEQEIREVEAEISKKRPTFI
KAKERVTHTQKKLESALKTLEQARKAHEAHQADIRKLEEELRQVEEEKAAWEATLTGTST
SRADVHLEEAQIREYEELKMEASRQAARYLQELDSVNREQKADQDRLDNEMRKKGEVENK
HRQKGHERNEAMKRVEKLNEHIKSSEQALEEQRRLRAELQADVGSCRGRAAALQQALEEV
ASQLGDARVDKHEEARRRKKQEIVESFKREIPGVYDRMINMCQPTHKRYNVAITKVLGKY
MEAIVVDTEKTARRCIQVLKERMLEPETFLPLDYIQAKPLRERLRDIKEPKNVKLLFDVL
RFEPAAIHRAVLFVTNNALVCETPEDASRVAYDLDRTKNSRYDALALDGTFYQKSGIISG
GSLDLARKAKRWDEKHLSQLKAKKEKLTEELRESMKKSRKESELTTVDSQIRGLESRLKY
ALTDRDTTLKQIKSFDAEIEELERKIEMFGPQVEEIERTIRARDAKIQEVKENMNNVEDV
VFRAFCRDIGVANIRQYEERELRAQQERAKKRMEYEAHIDRIGSNLEFERSRDTQKNVTR
WERTVQDGEDELEVSRQAEAKQRADVDRELRRAEELKAERAAARAALEKADDAAAGARRD
LAAVNKDIQTLQKHVAAVEARIESKRSDRHNILRQCKIDDIQVPLVEGSLDDTAEESEPS
SMSTTQQHLRDSRIRVDYRMLGESLRELDEPDEVKRRGDKLLKAINSLQNTVDKIQAPNM
RAMQKLNEVREKVNATNEAFLAARKRAHKAKLAFEKVKKERYDKFMNCFEHVANEIDAIY
KALAMNQSAQAFLGPENPEEPYLDGVNYNCVAPGKRFQPMSNLSGGEKTVAALALLFAIH
SYQPAPFFLLDEIDAALDNTNIGKVASFIRSKKGSLQTIVISLKEEFYGCADALVGICSE
PADCLVSDVITLSLESYND