| New model in OGS2.0 | DPOGS210621 |
|---|---|
| Genomic Position | scaffold4570:+ 9906-12731 |
| See gene structure | |
| CDS Length | 459 |
| Paired RNAseq reads | 4 |
| Single RNAseq reads | 13 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013480 (6e-60) |
| Best Drosophila hit | ND |
| Best Human hit | caveolin-1 isoform alpha (1e-15) |
| Best NR hit (blastp) | PREDICTED: similar to Caveolin-3 [Apis mellifera] (2e-37) |
| Best NR hit (blastx) | PREDICTED: similar to Caveolin-3 [Apis mellifera] (2e-37) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005886 plasma membrane GO:0016020 membrane GO:0005794 Golgi apparatus GO:0016021 integral to membrane GO:0045214 sarcomere organization GO:0042693 muscle cell fate commitment GO:0042383 sarcolemma GO:0007520 myoblast fusion GO:0060035 notochord cell development |
| InterPro families | IPR001612 Caveolin |
| Orthology group | MCL17198 |
Nucleotide sequence:
ATGTCCCCATCACGAATGGACAAACCGGACAACGAGCTCCGGGAGACCCTCGAGGATAGA
GACCCCAATAAACTAAATCAACACATACAGATAGTTTGGGACGACATCATCGGCGAGCCA
GACGGCGCGCGGAGTCCGGAGTGCGCGTGGCGTCTCAGCCACATCTGCTTCCGACACACG
AGGAACGTGTGCTACACACTATTGGCTGTAGTCGCCGCGCCGCCCTGCGCCTTCATACTA
GGATGTGGATTTGCCTGTTTGGCTTTTGAGCAAATCTGGTGTACGACACCGTGTCTGCGC
TGTGTGAAGATCTATTTCGCTACACTTCGGACCTTGGTACAATCGTGTATGGCGGCGACG
GTTGCGCCCGTGATGGAAGCAATCGGTCACATATTTCGACACATTCGCGTCAATGTCAGG
CGAGACGCGCCCGAAGAGCGGGATTTATTGATAGTGTAA
Protein sequence:
MSPSRMDKPDNELRETLEDRDPNKLNQHIQIVWDDIIGEPDGARSPECAWRLSHICFRHT
RNVCYTLLAVVAAPPCAFILGCGFACLAFEQIWCTTPCLRCVKIYFATLRTLVQSCMAAT
VAPVMEAIGHIFRHIRVNVRRDAPEERDLLIV