| New model in OGS2.0 | DPOGS204401 |
|---|---|
| Genomic Position | scaffold272:+ 11278-11904 |
| See gene structure | |
| CDS Length | 627 |
| Paired RNAseq reads | 1207 |
| Single RNAseq reads | 3496 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007712 (4e-105) |
| Best Drosophila hit | Rab-protein 7 (4e-91) |
| Best Human hit | ras-related protein Rab-7a (2e-95) |
| Best NR hit (blastp) | Rab7 [Bombyx mori] (6e-117) |
| Best NR hit (blastx) | Rab7 [Bombyx mori] (1e-105) |
| GeneOntology terms | GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport GO:0000166 nucleotide binding |
| InterPro families | IPR001806 Ras GTPase IPR013753 Ras IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR020851 Small GTPase IPR005225 Small GTP-binding protein |
| Orthology group | MCL15481 |
Nucleotide sequence:
ATGTCTTCAAGAAAAAAGGTTCTTTTAAAAGTTATTATCCTAGGAGATAGCGGTGTCGGT
AAAACATCCTTGATGAATCAGTTTGTCAACAAGAAATTTTCCAATCAGTACAAGGCTACA
ATAGGTGCTGATTTCCTCACGAAGGAAGTAATAGTTGACGATAGAATCGTCACTATGCAA
ATTTGGGATACGGCAGGGCAAGAGAGATTCCAATCTTTGGGGGTGGCGTTCTACCGTGGG
GCGGACTGTTGCGTCTTAGTTTTTGACGTAACTGCCCCTAACACGTTTAAGTCCTTGGAA
AGTTGGCGAGATGAATTTCTAATACAGGCTTCACCTCGAGATCCTGACAATTTCCCGTTT
GTTATACTAGGTAATAAGGTCGATTTGGAGAACCGTGCTGTTTCTGCTAAAAGAGCCCAA
CAGTGGTGTCAAAGCAAAAATGATATCCCATACTTCGAAACAAGTGCCAAAGAAGCAGTT
AACGTTGAGCTCGCATTCCAAACTATCGCACGTAATGCTTTAGCTCAAGAGACTGAAGCT
GAGCTGTATAATGAATTCCCAGATCAAATCAAGCTAAACGCTAATGACAACGGCCGTAAC
AGAGATGGAGATAACTGTGCTTGCTAA
Protein sequence:
MSSRKKVLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF
VILGNKVDLENRAVSAKRAQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEA
ELYNEFPDQIKLNANDNGRNRDGDNCAC