New model in OGS2.0 | DPOGS204403  |
---|---|
Genomic Position | scaffold272:+ 20049-33611 |
See gene structure | |
CDS Length | 1668 |
Paired RNAseq reads   | 1245 |
Single RNAseq reads   | 3161 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003178 (8e-76) |
Best Drosophila hit   | CG9413, isoform B (2e-179) |
Best Human hit | B(0,+)-type amino acid transporter 1 (2e-122) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC000583 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC000583 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0015171 amino acid transmembrane transporter activity GO:0016020 membrane GO:0003333 amino acid transmembrane transport |
InterPro families    | IPR002293 Amino acid/polyamine transporter I IPR004841 Amino acid permease domain |
Orthology group | MCL15691 |
Nucleotide sequence:
ATGAGCGATGCGATGCGCGAAAAGCTCGCGAGACTACTTCGCGGCTCTATCGCTGCGCAG
ACGCATACAGTCACCACGGACAAATTTCAAAACGGCACCACTCATCCTGTACTGCTTTAT
TCTGATGAAGGGAGCGCACGCGAAGGCGGATTGGTATGGCGCGGGTGTTCCGGGGACTGC
GACGCGGAAGATGGCTCGGCGGGAACGCTCGCCGATGGCAACGCCAACCCAGGAGACAAG
TTGGAGGGGTCGGACGCAGCTCCGGACGACCCTGTTCACCTCAAGAGACGGGTGGGACTC
TTCAGTGGGGTGGCTCTAATCGTCGGTACTATGATCGGTTCTGGAATATTCGTGTCGCCC
TCTGGGCTTTTGGAGCGTACAGGCTCAGTGGGCATAAGCTTCATTATATGGATGGCGTGT
GGGCTGCTCTCGCTGCTTGGAGCGCTCGCGTACGCGGAGTTAGGAACGATGAACACCTCC
TCTGGAGCTGAGTACGCATACTTCATGGACGCTTTCGGTGGACCACCGGCGTTCCTCTTC
TCTTGGGTGTCAACGCTGGTGCTGAAGCCGTCTCAGATGGCCATAATCTGTTTGAGCTTC
GCAAAATATGCGGTGGAGCCCTTCGTGTCAGAGTGCGAACCGCCTGACGCTCTCGTCAAA
CTTGTGGCACTTATATCTATTGTGATGATTCTTGCCGTCAACTGCTACAGTGTCAATCTA
GCGACGAACGTCCAAAATATTTTTACGGCTGCGAAACTGGTCGCCATCGCGATAATCGTC
TGTGGAGGAGCTTACAAACTCATTTTAGGTAATACGCGACATTTACAGGAGCCCAACTTC
GCAAGTAGCACCGCGACGCTTGGCAACATCGCCACGGCCTTCTACACCGGGCTGTGGGCC
TACGATGGATGGAATAACCTTAATTATGTTACAGAGGAAATTAAAAATCCTTCCAAGAAC
CTGCCTCTGAGCATAATAATTGGCATTCCGCTGGTGACGCTGTGCTACGCCTTGGTGAAC
GTGTCGTACTTGGCGGTGATGTCCGTGAGTGAGATGGCGGACAGTGAAGCGGTCGCTGTG
ACCTTCGGGAACAGACTGTTGGGCCCCATGGCGTGGCTCATGCCGCTGGCTGTTACTATA
TCAACTTTCGGCTCGGCGAATGGGACTCTATTTGTTGCGGGAAGGTTGTGCTTCGCAGCA
TCTCGGGAGGGACATTTATTGGATATACTTTCGTATGTCCATGTACGTCGGTTTACACCC
GCCCCGGGACTTATATTCCATTCTCTGATAGCGGTGGCGATGGTGCTGTACGGAACCATA
GATTCGTTAATTGATTTCTTCTCGTTCACTGCCTGGATATTCTACGGTGGGGCCATGCTG
GCGTTGATTGTGATGAGATACACCAAGCCTCACGCGCCTAGACCATACAAGGTGCCGATT
ATAATTCCCTACATAGTCCTGATCGTGTCCGCGTACTTGGTGGTCGCTCCGATCATAGAC
AACCCTCAGTGGGAGTACTTGTACGCGGGAGCTTTCATCCTCGCCGGCCTGCTGGTCTAC
CTGCCGTTCGTCAAGTGGGGATACTCTCTTCCCTTCATGGATAAAATTACAGTGTTTCTT
CAGATGGTTCTAGAAGTGGTGCCAACGTCGACGACTTTTGAATATTGA
Protein sequence:
MSDAMREKLARLLRGSIAAQTHTVTTDKFQNGTTHPVLLYSDEGSAREGGLVWRGCSGDC
DAEDGSAGTLADGNANPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSP
SGLLERTGSVGISFIIWMACGLLSLLGALAYAELGTMNTSSGAEYAYFMDAFGGPPAFLF
SWVSTLVLKPSQMAIICLSFAKYAVEPFVSECEPPDALVKLVALISIVMILAVNCYSVNL
ATNVQNIFTAAKLVAIAIIVCGGAYKLILGNTRHLQEPNFASSTATLGNIATAFYTGLWA
YDGWNNLNYVTEEIKNPSKNLPLSIIIGIPLVTLCYALVNVSYLAVMSVSEMADSEAVAV
TFGNRLLGPMAWLMPLAVTISTFGSANGTLFVAGRLCFAASREGHLLDILSYVHVRRFTP
APGLIFHSLIAVAMVLYGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPHAPRPYKVPI
IIPYIVLIVSAYLVVAPIIDNPQWEYLYAGAFILAGLLVYLPFVKWGYSLPFMDKITVFL
QMVLEVVPTSTTFEY