| New model in OGS2.0 | DPOGS204406 |
|---|---|
| Genomic Position | scaffold272:+ 78395-80500 |
| See gene structure | |
| CDS Length | 1626 |
| Paired RNAseq reads | 172 |
| Single RNAseq reads | 578 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007715 (7e-16) |
| Best Drosophila hit | CG1134 (7e-08) |
| Best Human hit | E3 ubiquitin-protein ligase LRSAM1 isoform 1 (2e-10) |
| Best NR hit (blastp) | PREDICTED: similar to leucine rich repeat and sterile alpha motif containing 1, partial [Tribolium castaneum] (5e-62) |
| Best NR hit (blastx) | PREDICTED: similar to leucine rich repeat and sterile alpha motif containing 1, partial [Tribolium castaneum] (4e-56) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005515 protein binding GO:0046872 metal ion binding |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type |
| Orthology group | MCL16672 |
Nucleotide sequence:
ATGGGTTGTGCTGTATCAGGGGTACAACGTACGATGTCTCTTTTTGGGAGACAATCTCAA
GGCCAGGATGTTCGCGCTAAGTTAGAAAGGAAACTGTACATCGCACGAGAATCTCCTGAT
CCGGAGTTTGATTTATCTGACTGTCAGCTTAAACGTTTGCCTGCCGAAATGAATATTAAA
TATAGACCTCCTCAAGTAACAACTGAGCTGCAATCGCAGTTACCAAATGCAATTCATAAT
CCCTTTGGTAAACAATTAAGCCTTACGTGGGAACAACAAGAGACAGCAATGATTGATCAA
GAAAACAAACTTCATCTAGCAAATCAAAGGCAAAGGGAAAAATTTTTGTCAACATTATTA
CAAGAGCAAAAAGATTTAGATGATGAAATATCTAAAATTCAAGAAAATAGGGAGTTGGAA
AGACGAAACTTGATGAAAACTATACAAAAAGAAGAAAAAGAGATAGAATGTATAGTAAGA
AATTTCCTACAATCAGAAAGACAAAATCCAGAAGTAATTCAACAACAGTTAGTATACGAG
CAGTTGGAACATGATCGTTTGCTTGAAATCGCCAGACAAAATTATGACAATGTGAAAAGA
TCTGACATCATAGCAAAAATGAAGGAGTTGTTAGAAAAAGACTGTTCTATTAATTACTAT
AAAAGACACTATAAGGATAATTTAAATAATGTTAAACAGAATTTATTAATTCAGGAATCT
GAAGGGGAACTCAAATTGGAAGAACTTTTGAATGCTAGAGATGAAATGCGCACAGATTTG
GTGCAACAGTTGTTGGAAGATCAAGATGTCCAACAAGCAATGGTGTCTAGTTTGTTGGAC
AGGGTTGATGCTAAAAGTTGGAGCCTTAGTCAGGAAATATCATTAATTTCTATGCATCTG
TCCAGACTCAGCATTATAGAACAAGAAAAGAAAAAAATAAATATGGCATTTAATTATAAT
GAGTTCCTACAGCAACGGATGAAGTTGGTAGGTCTCTTAGATGATCTTTTAGATCAGAAA
AATTTGAGGAGGAAACAATTAATAAACACCCTCAAGGAAGCAGAAAGTGAAGGAAACTAT
GCACATGACTTTTGGCTTAAAAGTTATCAAAAAGTGTTAGATGCTGCACCCAAGTCATTG
TTGAATGTGGGAAAGTTGGACCCTCTTTTTGCAAATCATTTGCTACAAGAAGGTGTTATA
CATTGTTTGCCATTCTTGGTTAAACTGTTAATTTCAGGTATATCTTTACTTGATATAAAT
AACGAAAATTTAAAGGAAAATGGAGTTTCCTTCACATCAGATAGAGAAAGCATCTTGAGA
GCTTTAAAGTTGTATGTAGAATCTTGTTCAGACATTATGAATGAGCCAGAACAAATTACG
TCTACAGAAGGTGCAAGTTTGTCTGGTGTTTTGGAGAGTAAAACCTTGGAAGTCCTTAAG
ACTAATGAAACTGAAAGCTCAGTAGTTGAGGGTGAATGTGTTGTTTGTATGGACTCAAAG
TCTGAGGTAGTTTTTGTACCATGCGGTCACATGTGTTGCTGTCAGCCCTGTTCACAGAAT
GAGTTAGAAACCTGTCCCATGTGCAGAATAAACATAGAGAGAAAAATTAAAGTCATCCTT
TCCTAA
Protein sequence:
MGCAVSGVQRTMSLFGRQSQGQDVRAKLERKLYIARESPDPEFDLSDCQLKRLPAEMNIK
YRPPQVTTELQSQLPNAIHNPFGKQLSLTWEQQETAMIDQENKLHLANQRQREKFLSTLL
QEQKDLDDEISKIQENRELERRNLMKTIQKEEKEIECIVRNFLQSERQNPEVIQQQLVYE
QLEHDRLLEIARQNYDNVKRSDIIAKMKELLEKDCSINYYKRHYKDNLNNVKQNLLIQES
EGELKLEELLNARDEMRTDLVQQLLEDQDVQQAMVSSLLDRVDAKSWSLSQEISLISMHL
SRLSIIEQEKKKINMAFNYNEFLQQRMKLVGLLDDLLDQKNLRRKQLINTLKEAESEGNY
AHDFWLKSYQKVLDAAPKSLLNVGKLDPLFANHLLQEGVIHCLPFLVKLLISGISLLDIN
NENLKENGVSFTSDRESILRALKLYVESCSDIMNEPEQITSTEGASLSGVLESKTLEVLK
TNETESSVVEGECVVCMDSKSEVVFVPCGHMCCCQPCSQNELETCPMCRINIERKIKVIL
S