| New model in OGS2.0 | DPOGS207243 |
|---|---|
| Genomic Position | scaffold55:- 120927-124280 |
| See gene structure | |
| CDS Length | 1704 |
| Paired RNAseq reads | 385 |
| Single RNAseq reads | 1010 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012059 (3e-51) |
| Best Drosophila hit | CG7246 (2e-39) |
| Best Human hit | U3 small nucleolar RNA-associated protein 6 homolog (1e-40) |
| Best NR hit (blastp) | PREDICTED: similar to RIKEN cDNA 4732497O03 [Apis mellifera] (3e-73) |
| Best NR hit (blastx) | PREDICTED: similar to RIKEN cDNA 4732497O03 [Apis mellifera] (5e-77) |
| GeneOntology terms | GO:0005634 nucleus GO:0006364 rRNA processing GO:0006396 RNA processing GO:0005622 intracellular GO:0005515 protein binding |
| InterPro families | IPR013949 U3 small nucleolar RNA-associated protein 6 IPR003107 RNA-processing protein, HAT helix |
| Orthology group | MCL12556 |
Nucleotide sequence:
ATGGCTGAACAAGTAAATCAACGTATAGAAGGTATGATAAATGAGTTGGAGCAAATGCGT
AGAACTAATCTTTACGAGGACGATGAAATAAGAGAAATTTCCCGTAAACGAAAGGAGTTT
GAATATAAAATACAACGAAGAATAAAAGAGAAAAGCGACTTTGTTCAATACATTGCATTT
GAATTGGCTCTTCTAGAAGATATTTCTCTTAGAAGGAAACAAGCAAAGTTGGGGGAAAAG
AAGAAAGATATTGAATATGCCATTGCTAAGAGACTAAATAAAGTTTTCAAACAATTTATA
TTTCGTTTTCAAAATGACATAGCTATTTACTTTGAGTACATAAAATTCTGTCAAGCTGTT
GGATTTGATTATGCGGTATCTGCTATTATTGACCAAATGTTGAGAGTACATGGTGATAAG
CCCAAAACATGGCAGTTGGCAAGCAAATGGGAAAGCAAGGAACAGAACAATCTAGAAAAT
GCTAGAAATTTTTTACTTAAAGGCATTCACAGACATCCCAATTCTGATATATTATACTTA
GATCTTTTTGATATCGAACTTATGATTGCTTTTAAAACTGAAGATGAAACAGAAAAAGCA
AAAAATTTCAAAAGGGCCGATGTTGTATGGAGAAATGGAATGAAGAACATTCCGGATGTG
AATTATTTATTTAAATTATGTGATATATCATTGAGGTATGGTGTTAACGAGGACATATCC
AATTCTATAAAGCAAGAAATATGGAACAGAAGATCCGAAAAGCGAGTTTGGTCATACATT
GCTTCTAAAGAATTGGAGGGATATCACTGGAAAGATATTGAGGAGTATGTGAGTGAAGAG
TTCAGTTATTCAAAAGAATTGAACTATTATATAGCTGTGTATGAGGAAGCTTTAATGCAG
TTTCCAGATGAAAATCTATCAACTATGTACATTCATGGGTTACTCGGTTTAAAGGATAAT
TTGTGTACAGATTTACAAAAAATTTGTGCCGTCAAACAAGCATGGTTCTTCAGTCACGAG
AACGGGTTGCTGAGTAATGATATGTATGTTTTTGGTATAAAAATGTTAAAGTTAGAAGGC
GAGATTACTGAAACTCAATTAACTGAGGTTCTGGATACAGCATTGGCAAAAAATCCGCTT
TATAGATATTTATGGGAAGAGAAAATTTTATTACACAAAAATGATGAAGATGTAATTCTA
AAAACACTAAAAGATGCCACAAAAATTTTAAAAACTGATGATGTTAGATGTCTTTGGAAT
TTTGTTTTTGATAATATTGAGTCACATATGGTTTTTAAGAATTGTTATTCTAAGCTACAG
TCATGTGAAAGTGTTGTATTTATGACTCTCAAACCCACACTCTTAAAGAAGATGTATGAA
CACAATGGATTGAAGGCGGCACGGCAAGTTTACGAAGAGTGTATAAGAACCCCTCCCACA
CAAGAAGAAGTACATAGCATAATGATTGACATTGAAATGAATCAAGAAAAACCATCACTC
AAGAATGTAAGAAAATGCTATGAGGCCCTAGTTCAACATCATGGCAAGAGTAATATTAAA
GTTTGGATGGACTACATAAACTTTGAACAAAAGTATGGAAATGCCCAAGCTGTGCCTTCC
ATTCATAGGAGGGCTATAGGAATGTTGGATAAAAATTCTGTCGATGATTTTATCAAAGCT
CAAACGCTAGCAAAATTAAATTAA
Protein sequence:
MAEQVNQRIEGMINELEQMRRTNLYEDDEIREISRKRKEFEYKIQRRIKEKSDFVQYIAF
ELALLEDISLRRKQAKLGEKKKDIEYAIAKRLNKVFKQFIFRFQNDIAIYFEYIKFCQAV
GFDYAVSAIIDQMLRVHGDKPKTWQLASKWESKEQNNLENARNFLLKGIHRHPNSDILYL
DLFDIELMIAFKTEDETEKAKNFKRADVVWRNGMKNIPDVNYLFKLCDISLRYGVNEDIS
NSIKQEIWNRRSEKRVWSYIASKELEGYHWKDIEEYVSEEFSYSKELNYYIAVYEEALMQ
FPDENLSTMYIHGLLGLKDNLCTDLQKICAVKQAWFFSHENGLLSNDMYVFGIKMLKLEG
EITETQLTEVLDTALAKNPLYRYLWEEKILLHKNDEDVILKTLKDATKILKTDDVRCLWN
FVFDNIESHMVFKNCYSKLQSCESVVFMTLKPTLLKKMYEHNGLKAARQVYEECIRTPPT
QEEVHSIMIDIEMNQEKPSLKNVRKCYEALVQHHGKSNIKVWMDYINFEQKYGNAQAVPS
IHRRAIGMLDKNSVDDFIKAQTLAKLN