| New model in OGS2.0 | DPOGS207313 |
|---|---|
| Genomic Position | scaffold55:+ 181299-187967 |
| See gene structure | |
| CDS Length | 1818 |
| Paired RNAseq reads | 1316 |
| Single RNAseq reads | 3273 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012095 (9e-14) |
| Best Drosophila hit | CG1317, isoform C (4e-60) |
| Best Human hit | E3 ubiquitin-protein ligase MARCH6 (2e-67) |
| Best NR hit (blastp) | PREDICTED: similar to ssm4 protein isoform 1 [Tribolium castaneum] (2e-174) |
| Best NR hit (blastx) | PREDICTED: similar to membrane-associated ring finger (C3HC4) 6 [Taeniopygia guttata] (4e-82) |
| GeneOntology terms | GO:0016020 membrane GO:0016021 integral to membrane GO:0005789 endoplasmic reticulum membrane GO:0005783 endoplasmic reticulum GO:0046872 metal ion binding GO:0016874 ligase activity GO:0008270 zinc ion binding |
| InterPro families | ND |
| Orthology group | MCL12138 |
Nucleotide sequence:
ATGGCATCTCTGCTTAGACTGAGAAGTGCAAAAAAAGCATTAGGATTTTGCTATGTGGTA
GTGAAAGTGGCATTATTATCTGTTGTAGAAATTGGTGTTATACCACTTGTGTGTGGATGG
TGGCTGGATTTGTGTTCTTTGTCAATGTTTGATGCAACACTCAAGGATAGAGAGTCCAGT
CTTCAGGCTGCGCCATGGACTTTAATGTTTATCCATTGGCTTGTCGGAATGGTCTATGTG
TACTACTTTGCTTCCTTTATCCTATTATTAAGAGAAGTGTTAAGACCCGGTGTTTTATGG
TTTTTGAAAAATCTTAATGATCCCGATTTCAGTCCCGTGCAGGAAATGATTCATCTCTCG
GTGTGGTCTCACATACGCCGTCTCGTTGTGTCCGCTATGGTTTTCGGCACGGCCGTACTA
TTCATGCTATGGCTTCCAATACGTGTAATAAAATACGTTCTACCCGGCTTCCTGCCTTAC
GCGGTCGCTGTGCACACCGATGCGCCGGTCAATGAACTCAGTTTGGAGCTTCTGTTGCTA
CAGGTTATCCTACCGGCTTTGCTGGAACAGTCTCATACCAGGACGTGGTTGAAGGCCGGT
CTACGTGCGTGGTGCGGCTGCGCTGCCGGCCTGCTAGGGCTTCGCTCTTACTTACTCGGG
GAGGCCTCGAGAGAGAACGAGCCCCACCCACCACCACACCCACCACATCAGTTAGGAGCC
GCTCATAGGTTACTGTCGTTCATGGACGTCCATAGGAGATGTTGCGATGCGTTGCCGACC
TTGATTGTGGAAGAGGGAGAGGAAGGGATGGGAAAAGGGAGAGGGGAGGAATTTGTGGGA
ACAGTGAAAGGGCAATTGATTCTCTCTGTCATCGTACGAAACGCAGCCATGAAAGACTAT
TTGCCGCCGCTCTTCTGTGAGAGGGTGGCTCTAATATGGCGAGATGGACCGGCTGGTTTC
GAGCCTTACGTTCGGGTGTCCTGGTTCCCTTTACGTCTCGGAGCGTTATTGGCACTCGTA
TCTGTGTCCTTGGTGTTGGCCAGCGCTCTCACATTGGTTATACCGGTAGCCATTGGTAGA
AAAGTCATGACGATCTGGCTACCAAAGGCATCAGAGGGAGTACACGAGCTATACACGGCC
GCTTGCGGTATGTACGTGTGTTGGGCGGTTGGTCGCGGCGGTGCGTTGGCCGCTGGTTGG
GCTCGCGGTGGTCGTGCAGCACTTCTGGCACGTGCGGCACTGTGGACCAGGAGGGCGGCG
CGGGCGGCACTAGCGGCACTCGCGCTGCTGGGTTTGGTGCCGCTCATGTTCGGACTGCTT
CTAGAATTGGTCCTAGTGATTCCTCTCAGGGTTCCCTTGGAGCAGTCTCCGGTACTGTTT
GTATGGCAGGATTGGGCTTTGGGTGTTCTATACACCAAGATAGTCTGCGCTCTCACAATG
ATGGGACCGGACTGGAGTATGAGGCGGGCCATTGAGAAAGCTTATAGAGACGGCATTAGA
GAAATGGATTTGCAATTTATCCTGCGATCTGTGGCCGCGCCACTGGTCCGCTGGCTGGGG
CTTGCGCTGGCTGTACCGTACGTGCTGGCACACAGTGTGGCGCCACTGGTACTGAGCGCG
CACGCGCAGAGGAACCTGCTGGTGCGACGGGTGTACCCTGCCTTGTTGCTCATAGCACTG
CTGGCTGCGCTCGCCCTCTTCCAGATTCGCCAGTTCACTAAACTGTACGAGCACATAAAG
AACGACAAGTACCTGGTCGGCCAGCGGCTCGTGAACTACGACCACCGCCGACACAAACAC
ACGGTCACCTCAAACTGA
Protein sequence:
MASLLRLRSAKKALGFCYVVVKVALLSVVEIGVIPLVCGWWLDLCSLSMFDATLKDRESS
LQAAPWTLMFIHWLVGMVYVYYFASFILLLREVLRPGVLWFLKNLNDPDFSPVQEMIHLS
VWSHIRRLVVSAMVFGTAVLFMLWLPIRVIKYVLPGFLPYAVAVHTDAPVNELSLELLLL
QVILPALLEQSHTRTWLKAGLRAWCGCAAGLLGLRSYLLGEASRENEPHPPPHPPHQLGA
AHRLLSFMDVHRRCCDALPTLIVEEGEEGMGKGRGEEFVGTVKGQLILSVIVRNAAMKDY
LPPLFCERVALIWRDGPAGFEPYVRVSWFPLRLGALLALVSVSLVLASALTLVIPVAIGR
KVMTIWLPKASEGVHELYTAACGMYVCWAVGRGGALAAGWARGGRAALLARAALWTRRAA
RAALAALALLGLVPLMFGLLLELVLVIPLRVPLEQSPVLFVWQDWALGVLYTKIVCALTM
MGPDWSMRRAIEKAYRDGIREMDLQFILRSVAAPLVRWLGLALAVPYVLAHSVAPLVLSA
HAQRNLLVRRVYPALLLIALLAALALFQIRQFTKLYEHIKNDKYLVGQRLVNYDHRRHKH
TVTSN