| New model in OGS2.0 | DPOGS209167 |
|---|---|
| Genomic Position | scaffold602:- 32672-34129 |
| See gene structure | |
| CDS Length | 1458 |
| Paired RNAseq reads | 311 |
| Single RNAseq reads | 708 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011482 (0.0) |
| Best Drosophila hit | succinic semialdehyde dehydrogenase, isoform E (4e-131) |
| Best Human hit | succinate-semialdehyde dehydrogenase, mitochondrial isoform 2 precursor (1e-115) |
| Best NR hit (blastp) | PREDICTED: similar to succinate semialdehyde dehydrogenase, mitochondrial [Tribolium castaneum] (3e-166) |
| Best NR hit (blastx) | succinic semialdehyde dehydrogenase [Ctenocephalides felis] (2e-163) |
| GeneOntology terms | GO:0004777 succinate-semialdehyde dehydrogenase activity GO:0009450 gamma-aminobutyric acid catabolic process GO:0055114 oxidation reduction GO:0005739 mitochondrion |
| InterPro families | IPR016161 Aldehyde/histidinol dehydrogenase IPR015590 Aldehyde dehydrogenase domain IPR016162 Aldehyde dehydrogenase, N-terminal IPR016163 Aldehyde dehydrogenase, C-terminal IPR016160 Aldehyde dehydrogenase, conserved site |
| Orthology group | MCL15752 |
Nucleotide sequence:
ATGCATTATTTGAGAAAGAGCGCGTATATTAACGGCCAATGGGTCAATGCCGAAAGCAAA
GCCGTATTTCCAGTGTTGAACCCGGCTGATGATAAGGTTATCGCTGAGATTCCTGACATG
GATGCTGCGGATGCAAAGAGAGCTATTGCTGCTGCTACAGAAAGCTTTCGTACGTGGAAG
TATACGACAGCTAAGGACAGAGCTGCAATATTAAGGAGATGGTATGACCTTTGTGTAAAA
AACCAGGATCATCTTGCAGAAATTATAACAGCGGAGGCTGGTAAGCCCTTGGCTGAAGCC
AAAGGTGAAATTGTTTATGGCAGTTCATTCTTGGAGTTCTTTGCTGATACTGCTCGACAT
ATTAACGGTGAAGTGATTCCAAGTCCCTGGCCAAACAAGCAGATCATGTTAACAAGACAG
CCTTTAGGGGTAGTGTCTGTTATTACGCCATGGAACTTCCCATTTGCTATGATCACTCGT
AAAGTTGGTGCTTTACTGGCAGCTGGCTGCACTTGTGTCATAAAACCTGCTGAAGACACT
CCGCTGACTGCTTTAGCAGCAGTTCAGTTAGCAGAAGAGGCAGGGTTTCCCAAAGGTATA
ATTAATGTAGTGACAGCAAGCAGAAAAAATGCCCCCATAGTGGGTAAAGTTTTATGTGAA
GATGCCAATGTTGGTTGTATTTCATTTACTGGTTCCACTCATGTTGGAAAGATTCTTTAT
GGAATGGCAGCAAAAGGAGTAAAACGAGTTTCCCTTGAACTAGGCGGTAATTGTCCATTT
ATAGTTTTTCCAAGTGCAGACATCAATCATGCTGTTGAACAAGCCATGATGGCTAAATTC
AGGAATAATGGGCAAGCATGTGTCGGAGCCAATCGATTCTTAATTCATGCCGATATTTTT
GATGCATTTGTAGAAGCATTTAAAAATAAGATTATGGAAAAATGTATTATCGGCCCCGGA
TACAAAGCTGGGGTAACTTGTGGGCCCCTAATAAATCTTGAGCAAGCTACCAAAGTGAAG
AGTTTAGTTGAAGATGCTTGTGGAAAAGGTGCGAACGTCGTGATTGGTGGAAAACCTGCT
CCCAAACATGGAACCAAATTTTATGAATCTACAATATTGACAGATGTAAAGCCGGAAATG
AAAATATATGGTGAAGAAATATTTGGGCCGGTTGCCGTTTGTCATAAATTCAATACAGAG
GAGGAAGTTCTAGAGATTGCGAATAGTACCAGAACAGGGCTCGGATCTTATGTTTTTACA
AGAGATCTCGGTCAGGCATTTAGGATGTCTCAAAAGTTAGAATTCGGCATGGTGGCCATC
AATGATGGTGTATTATCAGCAGCAGAACCGGCATTCGGCGGCATTAAGGAGTCGGGAATC
GGCAGAGAAGGCAGCAAACACGGCGTGGAAGAATACACAGATATTAAATATACTCTATTT
TCAGCTTTAGACAAATGA
Protein sequence:
MHYLRKSAYINGQWVNAESKAVFPVLNPADDKVIAEIPDMDAADAKRAIAAATESFRTWK
YTTAKDRAAILRRWYDLCVKNQDHLAEIITAEAGKPLAEAKGEIVYGSSFLEFFADTARH
INGEVIPSPWPNKQIMLTRQPLGVVSVITPWNFPFAMITRKVGALLAAGCTCVIKPAEDT
PLTALAAVQLAEEAGFPKGIINVVTASRKNAPIVGKVLCEDANVGCISFTGSTHVGKILY
GMAAKGVKRVSLELGGNCPFIVFPSADINHAVEQAMMAKFRNNGQACVGANRFLIHADIF
DAFVEAFKNKIMEKCIIGPGYKAGVTCGPLINLEQATKVKSLVEDACGKGANVVIGGKPA
PKHGTKFYESTILTDVKPEMKIYGEEIFGPVAVCHKFNTEEEVLEIANSTRTGLGSYVFT
RDLGQAFRMSQKLEFGMVAINDGVLSAAEPAFGGIKESGIGREGSKHGVEEYTDIKYTLF
SALDK