| New model in OGS2.0 | DPOGS205116 |
|---|---|
| Genomic Position | scaffold1001:+ 782-5177 |
| See gene structure | |
| CDS Length | 1194 |
| Paired RNAseq reads | 2969 |
| Single RNAseq reads | 8619 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005899 (5e-169) |
| Best Drosophila hit | hexosaminidase 1, isoform E (5e-125) |
| Best Human hit | beta-hexosaminidase subunit beta preproprotein (3e-42) |
| Best NR hit (blastp) | beta-N-acetylglucosaminidase [Choristoneura fumiferana] (0.0) |
| Best NR hit (blastx) | beta-N-acetylglucosaminidase [Choristoneura fumiferana] (0.0) |
| GeneOntology terms | GO:0004563 beta-N-acetylhexosaminidase activity GO:0005575 cellular_component GO:0006032 chitin catabolic process |
| InterPro families | IPR017853 Glycoside hydrolase, superfamily IPR001540 Glycoside hydrolase, family 20 IPR015883 Glycoside hydrolase, family 20, catalytic core IPR013781 Glycoside hydrolase, subgroup, catalytic core |
| Orthology group | MCL16250 |
Nucleotide sequence:
ATGGTCCGTGACGTCACAATCGATGATAAACCCGTGTACCCTTACAGAGGAGTGTTGTTG
GACACCGCGAGGAACTATTTCTCTATCGACTCCATCAAAGAGACTATCGAGGCCATGAGT
AGCGTGAAACTGAACACTTTCCACTGGCACATCACAGACAGCCAAAGTTTCCCCTTCGTA
TCCAAGAGACGGCCAGAACTCACTAAATACGGAGCTTACAGTCCCAGTAAAATCTACACT
GAAGAGATGATCCGTGATGTGGTGGAGTTCGCTCGTGTCCGCGGAGTCCGAGTGCTGCCC
GAGTTTGACGCTCCAGCACACGTGGGCGAGGGCTGGCAGGAGACAGACCTCACTGTTTGC
TTCAAGGCTGAACCTTGGGCGTCGTACTGCGTGGAACCTCCGTGCGGTCAATTGAACCCT
ACCAAGGAGGAGCTGTACGATGTTCTACAAGACATCTACACGGATATGGCCGATGTTTTC
CCGTCGGACCTCTTCCACATGGGTGGAGACGAGGTGTCGGAGCGCTGCTGGAACTCGTCG
CGCCAGGTGCAGCAGTTTATGGAGGAGAACCGCTGGGGACTGGACAAGGCCAGCTATTTA
CAACTGTGGAACTACTTCCAGAATAAAGCCCAAGATAGGGTGTACAAGGCATTTGGTAAA
AGGATCCCACTGATTCTATGGACCAGCACGCTAACTGATTACAGTCACGTCGACAAGTTC
TTAAACAAAGACGATTACATTATTCAAGTGTGGACTACTGGCGAAGACCCTCAAATATCA
GGTCTCCTGCAGAAGGGTTATCGTCTCATCATGTCCAACTACGACGCCCTGTATTTCGAC
TGTGGTTTCGGTGCTTGGGTTGGAACTGGCAACAACTGGTGCTCTCCGTACATCGGATGG
CAGAAAGTTTATGAAAATAGTCCTAAACAGATGGCGAGAGACCACCAAGATCAAATCCTA
GGTGGTGAAGCAGCGCTGTGGTCTGAGCAGTCTGACTCAGCGACCCTGGACAGTCGCCTG
TGGCCGCGGGCCGCCGCCCTCGCTGAGAGGTTGTGGGCGGAGCCCGCGACCAGCTGGAGG
GAGGCCGAGCGGCGGATGTTGAACGTACGCGAGCGTCTCGTCCGTAAAGGCATCAAAGCG
GAGTCCCTGGAGCCCGAGTGGTGCTATCAGAACGACGGCTACTGCTACGCCTGA
Protein sequence:
MVRDVTIDDKPVYPYRGVLLDTARNYFSIDSIKETIEAMSSVKLNTFHWHITDSQSFPFV
SKRRPELTKYGAYSPSKIYTEEMIRDVVEFARVRGVRVLPEFDAPAHVGEGWQETDLTVC
FKAEPWASYCVEPPCGQLNPTKEELYDVLQDIYTDMADVFPSDLFHMGGDEVSERCWNSS
RQVQQFMEENRWGLDKASYLQLWNYFQNKAQDRVYKAFGKRIPLILWTSTLTDYSHVDKF
LNKDDYIIQVWTTGEDPQISGLLQKGYRLIMSNYDALYFDCGFGAWVGTGNNWCSPYIGW
QKVYENSPKQMARDHQDQILGGEAALWSEQSDSATLDSRLWPRAAALAERLWAEPATSWR
EAERRMLNVRERLVRKGIKAESLEPEWCYQNDGYCYA