| New model in OGS2.0 | DPOGS214093 |
|---|---|
| Genomic Position | scaffold185:+ 69272-74003 |
| See gene structure | |
| CDS Length | 2283 |
| Paired RNAseq reads | 412 |
| Single RNAseq reads | 1045 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006878 (4e-75) |
| Best Drosophila hit | myospheroid (3e-81) |
| Best Human hit | integrin beta-6 precursor (4e-74) |
| Best NR hit (blastp) | myospheroid protein, putative [Pediculus humanus corporis] (8e-99) |
| Best NR hit (blastx) | myospheroid protein, putative [Pediculus humanus corporis] (2e-109) |
| GeneOntology terms | GO:0007417 central nervous system development GO:0007517 muscle organ development GO:0008305 integrin complex GO:0007391 dorsal closure GO:0007494 midgut development GO:0016477 cell migration GO:0016203 muscle attachment GO:0016339 calcium-dependent cell-cell adhesion GO:0007157 heterophilic cell-cell adhesion GO:0007160 cell-matrix adhesion GO:0050839 cell adhesion molecule binding GO:0005925 focal adhesion GO:0016340 calcium-dependent cell-matrix adhesion GO:0004872 receptor activity GO:0007427 epithelial cell migration, open tracheal system GO:0007411 axon guidance GO:0007608 sensory perception of smell GO:0007426 tracheal outgrowth, open tracheal system GO:0008340 determination of adult lifespan GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces GO:0007155 cell adhesion GO:0008360 regulation of cell shape GO:0005488 binding GO:0007229 integrin-mediated signaling pathway GO:0031252 cell leading edge GO:0035099 hemocyte migration GO:0006930 substrate-bound cell migration, cell extension GO:0035160 maintenance of epithelial integrity, open tracheal system GO:0030718 germ-line stem cell maintenance GO:0005886 plasma membrane |
| InterPro families | IPR016201 Plexin-like fold IPR015812 Integrin beta subunit IPR002369 Integrin beta subunit, N-terminal IPR013111 EGF, extracellular IPR002035 von Willebrand factor, type A |
| Orthology group | ND |
Nucleotide sequence:
ATGCGAGTGATATATTTTGTCGCAATTTGTTTCGTTTTTCGATGTTCGTCATCTATAGAC
CTGTGTAAACAGCACAAAACCTGCCACAACTGCATTAGGGATGCCAATAAGTGCGTTTGG
TGCGACAGTCACAAATTTAATGACACCAAATGTAAATCGGCGGCAGAACAATTGGAAAAC
TGGTGCCCACACACTATAATTAACCCAAAAAGTGTTGTTAAAGTTATTACAAACAATGAT
TTTTCATCAGAAAGGGGTAAAGTGATTCATATGAAACCACAGCAGATACAAATAAATATC
AGACCTGGAGATGTCATTGATTTTGATTTCTCGTTTAGAAAAGCGCAAAACTATCCAGTG
GATTTATATTTTCTTTTAGACGGTTCGGCTTCAATGGCATCTGTTAAGAATGAAATTGTT
AAGCAGACTGAAAGTATATATCAGATGATGAAAAGTATGACTGATAATGTTTATTTGGGA
ATGGGATCTTTTGTAGACAAAAATTTGTTGCCATTCACTAATGTACTAAACAGCACAAAC
ACTTACTCATTCCGCAATAGACTAAAGCTCATTAATGATCCCGAGGCCTTTAAAAAAACC
ATTAATGATACAGCATTCGGTTATAATTATGACGAACAAGAGGGTACATTAGATGCTCTC
GCACAAGTTATTGTATGTAAAGAACAGATTGGTTGGCGAGAAGAATCTAGAAAAATCATT
TTAGTTTTCACTGGAGCATCGTTCCACGCGGCTAGTGATGGAATTTTCGGAGGTGTCGTT
GAACCGTATGATGGCAAATGTTATCTAGAAAATGATGTATATTCTAAAGAAACTGTAATG
GACTATCCTTCAGTCGGTATTATCAATAAACTGGCATCTGAAGATGAAAAAATTATAATT
TTTGCCATCGATGAAGAAGCAAAGAACATTTATAAATCACTTACGAACTTTATTACTGGC
TCTAAAGTAACAAAATACGGTGGCGATCTAATTGCAAACATGCTTAAAACTGTTTATGAG
GAAATTTCTCAAAATTTAAAACTGAAAGTAAACATGGACGCTGAACATCGAAAGAATTTT
GAATTTTTCTTCAATCCAGATTGTTATAATGCTTATAGACAATATGAAGACTGCGAAGTA
GTACATTACGAAGAGAAACATTTTACTGGGACCATAAAACTTCTGTCGTACATTGAAAAT
GATAGCGTTAAGATGGATATTGTTTTTGAAGGTATCAAGGAAAAAATTGAATTAGACATA
TCTATTATAAAACGATGTGACTGCAAAAGGGAAGAAAATTCAACGTCCTGCAATTACCAC
GGCTCCCTGTATTGTGGAATATGTGAATGTGAAGAAAACAGATATTACGGTGATAGTTGT
CAATGCCAAAACACTACAAGCGCCTTAAATCCAAGTGATGAAGCTACTTGCATCGCTCCC
GGTAGTAACTCTACATGTCATAACCGTGGTTCTTGCAAGTGTGGAATGTGCAAGTGTAGG
AATGGATACAAAGGTAAGTTCTGTGAATGCAGTGATCACAGCTGTGAGCGGGGCGCTGAT
AACGAGTTGTGTTCTGGTCCTCTCAGAGGTGTATGTGATTGTGGAAAGTGCAACTGTAAG
AGTGGCTGGACTGGTTCGGTATGCGATTGTTCCACTTCCAAGACGGAGTGCTTAAGTAAT
GACCAGACATTATGTAGTAATCGTGGCGTTTGCATATGCGGTCGATGCAAATGCAACGAT
ATCTCCGATTGGGATGTTAGGACTAAAGAGCAACCAGACTGCCAACTTTCCTGTCCCCAA
GATAATCAGGATCCATCATCATGTCGCCACAGACAATGCATCAACATAGAACCAATCGTT
TTATGCCACCTTAATAGCGACGATTGCCAGCCTGTAGACAACCTAAATATCACACTAATA
AAGAATCTGACCATGGTCCAAGCGGAAGGAGATTGGTACCATTGCAGTAGAGTCATAGTT
GATGTGGGATGTTATACTAAATTCCTGTACAGATATTCAAAAGACAAATATGGAATTGAA
ATCGTTATGGACAAGAATGTTGATTGCATCGAAGCAAATTATATCCGAGGTTTCATATGC
TTGTTTACTCTGATCTTCATCGGAGTGGGAACTCTGATCGCGTGGAAATATTGGACGGAC
CGGAGAGATCGTTTGGAATACGAAAAATTGTTCCAACAAGTAAACGAAACTGAGACTGAG
AACGTCCTCTTCGTACCACCGCTACATAGTTACAGAAACCCCTCGTATCAAGGACACTTA
TAA
Protein sequence:
MRVIYFVAICFVFRCSSSIDLCKQHKTCHNCIRDANKCVWCDSHKFNDTKCKSAAEQLEN
WCPHTIINPKSVVKVITNNDFSSERGKVIHMKPQQIQINIRPGDVIDFDFSFRKAQNYPV
DLYFLLDGSASMASVKNEIVKQTESIYQMMKSMTDNVYLGMGSFVDKNLLPFTNVLNSTN
TYSFRNRLKLINDPEAFKKTINDTAFGYNYDEQEGTLDALAQVIVCKEQIGWREESRKII
LVFTGASFHAASDGIFGGVVEPYDGKCYLENDVYSKETVMDYPSVGIINKLASEDEKIII
FAIDEEAKNIYKSLTNFITGSKVTKYGGDLIANMLKTVYEEISQNLKLKVNMDAEHRKNF
EFFFNPDCYNAYRQYEDCEVVHYEEKHFTGTIKLLSYIENDSVKMDIVFEGIKEKIELDI
SIIKRCDCKREENSTSCNYHGSLYCGICECEENRYYGDSCQCQNTTSALNPSDEATCIAP
GSNSTCHNRGSCKCGMCKCRNGYKGKFCECSDHSCERGADNELCSGPLRGVCDCGKCNCK
SGWTGSVCDCSTSKTECLSNDQTLCSNRGVCICGRCKCNDISDWDVRTKEQPDCQLSCPQ
DNQDPSSCRHRQCINIEPIVLCHLNSDDCQPVDNLNITLIKNLTMVQAEGDWYHCSRVIV
DVGCYTKFLYRYSKDKYGIEIVMDKNVDCIEANYIRGFICLFTLIFIGVGTLIAWKYWTD
RRDRLEYEKLFQQVNETETENVLFVPPLHSYRNPSYQGHL