| Genomic Position | scaffold5137:+ 7-1190 |
|---|---|
| See gene structure | |
| CDS Length | 1164 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 9 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | non-LTR retrotransposon CATS [Bombyx mori] (5e-15) |
| Best NR hit (blastx) | non-LTR retrotransposon CATS [Bombyx mori] (2e-13) |
| GeneOntology terms | ND |
| InterPro families | IPR012337 Ribonuclease H-like IPR002156 Ribonuclease H domain |
| Orthology group | MCL18140 |
Nucleotide sequence:
ATGAACAGATGTCTGTCACTCCAACACTTTCCCCGACAGTGGAAAAGGGCATACGTTAAG
ATCATCCCCAAACCAAACAAGACTGACCATACCGACTTGATCGGCTACAGACTTTATTGG
TTTGCTGATGGTGTTCGGAAAGCTTCTCGAAAATGCTTGACCACGCCGGCTCCAGGGTGT
CTAAGACTATGTCCAAGGGCTACATCCAGGGTTCAACCTGTGTCCCTCACTTGTAGAATA
TCATCCTCGATGATCTCCTTGAAATCGAGCTGCCTTCGGGCTGTCGACTCCAGGCTTTCG
CGGGTGATGTTTTGTTGGTTGCATCAACGAAGAGCTCACCCTAAAACCACCCACACCTTC
ACCGATGGGAGCAAACTTGAGGATGGTACGGTCGGGGCGGCCTTCGTCAGTTATGACACA
ATCCCGTCAGTAAAAAGTTCAAGCTCCACAACAGTTGTACTGTTTTTCCAGGCTGAACTT
CTAGCCATCCTCAACCTTGCGAATGGGTCTCTTCCAACCAACATACACCCACGCGCTGCC
ATTCTGGCCATCCAGAAGCGCAGCAACACACACCACTTGGTTCCGAAAATACACTCGACA
GTACACCATTCGTCCGGGTCCATCGAGTTTGCGTGGGTCAAGGCCCACGTGGGCATAGTA
GGGAACGAGGCCGCAAACACCGCTGCCAAGCGGGAGGCTAAGCTCCACAAAGCCTCGGAC
TACACACAATTTCCTATCACTTTTATAAAACACTCTACACGAGTCTTGCAGTCTCGATAC
GACAGCGAGCCTAAGGACAAAACTAAACAACACCTCTCTACAATTGAACACCTCATTAAA
TTACACTCACTTGCGCACAACACATTCACACTTACCCAGTCACTTACAGAAACCGCCTAC
ACAGAACAATACTCACACTGGGTTAAGGTCACGGAGGATGCTGGCTGTACGTGCGATGGC
ACCACGGTGCAGTCAATGGGTCACGTACTCGAGCACTGCCCGCGGTTCATCGCCCCGAGA
TCCGACCACCAGATAATCTGCAGCCACGCCGGGGTCTCTCCGTTCAACATGGCCTCCCTT
CTGGAGGACAAAGAAGCAACCTATCACTCAAATTACTCACCCATTTCGTCCATGTTACTT
CCATCGTTCAAAGTTGAATTTTGA
Protein sequence:
MNRCLSLQHFPRQWKRAYVKIIPKPNKTDHTDLIGYRLYWFADGVRKASRKCLTTPAPGC
LRLCPRATSRVQPVSLTCRISSSMISLKSSCLRAVDSRLSRVMFCWLHQRRAHPKTTHTF
TDGSKLEDGTVGAAFVSYDTIPSVKSSSSTTVVLFFQAELLAILNLANGSLPTNIHPRAA
ILAIQKRSNTHHLVPKIHSTVHHSSGSIEFAWVKAHVGIVGNEAANTAAKREAKLHKASD
YTQFPITFIKHSTRVLQSRYDSEPKDKTKQHLSTIEHLIKLHSLAHNTFTLTQSLTETAY
TEQYSHWVKVTEDAGCTCDGTTVQSMGHVLEHCPRFIAPRSDHQIICSHAGVSPFNMASL
LEDKEATYHSNYSPISSMLLPSFKVEF