| New model in OGS2.0 | DPOGS210165 |
|---|---|
| Genomic Position | scaffold702:+ 57508-64394 |
| See gene structure | |
| CDS Length | 2670 |
| Paired RNAseq reads | 2788 |
| Single RNAseq reads | 6054 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013501 (1e-20) |
| Best Drosophila hit | CG5524 (2e-60) |
| Best Human hit | structural maintenance of chromosomes protein 6 (1e-65) |
| Best NR hit (blastp) | structural maintenance of chromosomes 6 [Tribolium castaneum] (6e-95) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_131216 [Branchiostoma floridae] (2e-87) |
| GeneOntology terms | GO:0006281 DNA repair GO:0005634 nucleus GO:0005694 chromosome GO:0006310 DNA recombination GO:0005524 ATP binding GO:0005622 intracellular GO:0000166 nucleotide binding |
| InterPro families | IPR010935 SMCs flexible hinge |
| Orthology group | MCL14163 |
Nucleotide sequence:
ATGTACAGAGATATCGCTGAAGAAGACATAGATGGATTAGTTCTGAGTATCCATCTAGAA
AACTTTTTCTGTCATGATAATTTTTATATAAATTTTGATGATCATAGAAATAAGAATATT
CATTCAGTAGTTGGTCGTAATGGCAGTGGTAAGAGTGCAGTTCTTACAGCATTGATAGTC
GGCTTGGGAGGTAGGGCATCTGCCACCAGTAGAGGAAACAATTTGAAATCATTCATTAAA
GAAGGCAAGACCCAGGCAACCATCGAGATAAAAATAAAAAATAGCAGTCCAAGGGCATAC
AAACCTGAAATCTATGGTGATAGCATAACAATTGTGCGAACGATTACTTCTACGGGTGGA
GGTTATAAATTCAAAAACAGTCAAGGTGTGGTGAAATCTACAAAGGGTTCTGATATAAAC
GCCATAACACTGTTTCATGACATACAAGTCGATAACCCAATATCTGTTCTGAACCAAGAT
GATGCTAGGACTCTACACGGCAAAGATGGAAAGAAAAAATACACATTGTTCAGAAAAGCG
ACGCACTTTGATCAAACCGAGGCTTATTATGACAAGGCGTTGGAAAACTGTAACAAAGCT
AATTCCATATGGAAGAGGAAGAATGAGGCATTTGAAAAACTTTCCAAAGAACACGAAAGA
CTTACCAGACTATACAATCAGTTAAAACCGAAAGAAGAGATAGAAGCTCAGAAAAAAGCA
ATTCAAGATGAGATTAAATGGTGGGACATTAGAGAGATTGAGAAAGAAGTAAAGATTATT
CAGACTAAGTGTAGTGAAGAACGTGCTAACTGTCAAAATAATACTGAAAAGCTAAGATCT
CTGGAAGAAAAGTATGGAGGCGGGAACAGTCAAGTTGAGCTTTTGAAGCAGCAGTTGACT
GAGCGTGAAGCTCGTCATCGTGAATTGCTGCGAGAAGTGCGTGAAGCGGAGACAGCGCTG
CGTATGGCCAATGAGAGCCTACAAAGTGAGCGACAAGCGCACGCGCAGATAAAAACGCGA
CGTTCCAGGGAACAGGGGCAGGTCGCGGACTTGGAGAGGGAGATACAGAAAATATGCGTG
CATGGTGAGAACGACAGCGCATCTCGTCGCGAGGCGTTAAAACGTGAATTGCAGGAGCGG
CAGGTCGAGTTGAGAGAAGCTAGCTCCAGACACGAGACGGTGGCGCATGAAGAGACACAG
GCGGCTCAGAACGCGAACAGAGCGGTCGACGAGTATGACGACTTTAGGAGGCAGACAAGC
GAACTTCAGGCGAAGATGGAGAAACTGTCCGTGAGTGTCCGCGAGCTGAAAGAGCAGTCT
ACTGACTCGCTAGCAGTTTTCGGCGCTACGATGGTGGAGTTCTGTGCTCGAGTCCGAACA
GAAGTCCAGAACGGACAGTTCACGGCAGAACCCAGAGGACCTATTGGCAGCTTTGTGAAA
GTCAAAGACAAACGTTGGGCCGGAGCCTTGGAACACTTATTGGACGGATGCATGTACAAC
TTCTGTGTGAACGAACCGAGAGATTCGAAACGGCTCTTCAAATTAATGGATGAGGTTTGG
AAGGACAGAGGCGGTCGTAAGCCGGGTGTGACGTGTAGCGCCTTCAGGCCGCAAGTTCAC
GACGTCAGCGCGCGCAGAGTTTCCGCCCCCGGCGCCGTCTGTGCCCTCGACGCCCTTGAA
ATAGATGACGTGGTGGTCGCCAATTACCTCATAGACAACCTCGATCTAGAGACAGTCTTG
CTGGTGCCCACCCACGATGACGCGGTTCGTCTCTGTGTGTCCGCTGAGAACGTGCCTGCC
AACTGCTATAAGGTGGTCACGGCGGACTGCTCGGAGTACATGCCGGCGCCGCGGTACAGA
ATATACGGAGGAAAGGAAAGGACGCCTCACTTCCTCAGCACCTCTATAGGAGATCGAACC
AGGCAGCTCGGAGAAAAGATCGAAGAGTTGAAGACGACGCTGTCAGAGAGGAGAGCAGAG
GAGGAGCGGCTGGCGGCCGCTAAAGAAAGTGCTCGGAAGTTACAGGAACAAGCTGCTGCT
CAGTTGCACGCGCTGCAAAGTAAGCTGCGGCAGTGCGAGCGGCGAGTCGCCGAGACCAAG
GAAGCGCTCGAGGAGCAGGCGGCGCCGCGGCGAGCTGTGCTAGAGGAGGAATATGAAAAA
TATAAAGAGAAGATCAAATGTCTGGATGAGAAGTTACAAGCTATGGAGGAGAAAATTCGT
GTTTGTGGAAAGGAGAAAGAGGAGGCTGGCGGGCGCTTAGCGCAAGTCAGGGCGGAGTTC
AACGAAATTGATGCGGAATATAAGAAACTCAAGGATAAACTGATGCAGAAAGAGCTGGAA
ATTGAAAACGGGCAGACAAAGAAGATGAGCTTCGAGCTGAGAGTCAAAGAGGGACAGAAA
AAGTTGGAGGAGCTCGAGAACGCGTTGGCGCAAAGCAAAAACGTGCTGGAACAACAGACA
CAAGGACTGTCTGACAGGCCGCAGCAGCTCAGGTCCAAATCCGAGTTGCAAAATCAATTG
AGAGAAATTGAACAAAAACTGTCCGCCTTAGACTCCAACCGCCTCCCGAGCCGGAAGAAA
GTTCACGCCGACTTAGTAGCTGTGACGAAGAGAAAAAATTTCGTTGAGACCGAATTGAAA
ACGCTCAAGGATCTCATCAAGGAGGTGTGA
Protein sequence:
MYRDIAEEDIDGLVLSIHLENFFCHDNFYINFDDHRNKNIHSVVGRNGSGKSAVLTALIV
GLGGRASATSRGNNLKSFIKEGKTQATIEIKIKNSSPRAYKPEIYGDSITIVRTITSTGG
GYKFKNSQGVVKSTKGSDINAITLFHDIQVDNPISVLNQDDARTLHGKDGKKKYTLFRKA
THFDQTEAYYDKALENCNKANSIWKRKNEAFEKLSKEHERLTRLYNQLKPKEEIEAQKKA
IQDEIKWWDIREIEKEVKIIQTKCSEERANCQNNTEKLRSLEEKYGGGNSQVELLKQQLT
EREARHRELLREVREAETALRMANESLQSERQAHAQIKTRRSREQGQVADLEREIQKICV
HGENDSASRREALKRELQERQVELREASSRHETVAHEETQAAQNANRAVDEYDDFRRQTS
ELQAKMEKLSVSVRELKEQSTDSLAVFGATMVEFCARVRTEVQNGQFTAEPRGPIGSFVK
VKDKRWAGALEHLLDGCMYNFCVNEPRDSKRLFKLMDEVWKDRGGRKPGVTCSAFRPQVH
DVSARRVSAPGAVCALDALEIDDVVVANYLIDNLDLETVLLVPTHDDAVRLCVSAENVPA
NCYKVVTADCSEYMPAPRYRIYGGKERTPHFLSTSIGDRTRQLGEKIEELKTTLSERRAE
EERLAAAKESARKLQEQAAAQLHALQSKLRQCERRVAETKEALEEQAAPRRAVLEEEYEK
YKEKIKCLDEKLQAMEEKIRVCGKEKEEAGGRLAQVRAEFNEIDAEYKKLKDKLMQKELE
IENGQTKKMSFELRVKEGQKKLEELENALAQSKNVLEQQTQGLSDRPQQLRSKSELQNQL
REIEQKLSALDSNRLPSRKKVHADLVAVTKRKNFVETELKTLKDLIKEV