| New model in OGS2.0 | DPOGS207792 |
|---|---|
| Genomic Position | scaffold2726:+ 6608-8401 |
| See gene structure | |
| CDS Length | 1095 |
| Paired RNAseq reads | 263 |
| Single RNAseq reads | 719 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005325 (7e-85) |
| Best Drosophila hit | CG9418 (2e-23) |
| Best Human hit | high mobility group protein 20A (5e-39) |
| Best NR hit (blastp) | PREDICTED: similar to high mobility group 20A isoform 1 [Apis mellifera] (1e-51) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-43) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005515 protein binding GO:0005634 nucleus |
| InterPro families | IPR000910 High mobility group, HMG1/HMG2 IPR009071 High mobility group, superfamily |
| Orthology group | MCL11455 |
Nucleotide sequence:
ATGGAACCTGATAATACTCAATCTGTTGAAATACAAACAGTGGAAAACGAGGCATCTATT
AAATCTACGACTGCCGATCACGAAGATAGTGCATTAGCTGCAAATTCAACAAATGGTAAT
GATACCGACGTAGGCACTCAACCCCCAAATTCTAAAGATATTCAGAAACCGTCACCCAAA
AAGCCGAAAAAGAGGAAACCTAAAATACCACGGGATGTAACTGCGCCTCGCCAGCCTCTG
ACTGGTTATGTTAGATACCTCAATGAACGCCGTGATCAGTTAAGAGCTGAACAACCAGAA
TTGGGTTTTGCGGAGTTAACTAGACAACTAGCCAGTGAATGGAGCAAACTCCCCACTGAA
GAAAAACAGCACTATTTGGATGCAGCTGATCAAGATAAGGAAAGATATATTAAAGAATGG
GCTGAGTATAAAAAAACTGATGCTTATAAAGAGTTTAGAAAGCAGCAAATGGAACAAAAA
GATACAGGAACTGTAACCAAAAAGGTTAAATCATGTGTTGATAATAATATTATAAGTGTT
ACAGGAGGTGCTACTCAAATTTCTGCTGAACCTGTTGTGGGTGGGAATATATCAACTGGT
TCTATTCTCAGTGCAACAAGGCAACAGACTCCACCTCGACCGAGGCCCTGCATAACACCT
GCTTCAGGTGAAGAAATGTCTGGAGATACAGATATACCTATTTTCACTGATCAATTCTTA
CAACACAACAAGTTGAGGGAATCTGAACTTCGTCAGTTGAGAAAAGCAAATTCAGATTAT
GAGCAGCAGAATGCTATATTACAACGTCATGCTGAAGAAGTAAGTGCTGCTACAGCTAGG
CTTCGAGCTGAAACAACCGCAGCAGCCGAACGCACAGCCTTGCTTGTAGCTCATCGCAGA
CTTTTAGTGACATCACTAGTTCAGGCTTTACAATCTGTTGTGCTGCCTTTACAAAACGGA
CCAGCTGGTGCATCAGAGTCCAACATAGAGGAGTACATGGAAAAATTACAGAGCTTGGTA
ACAGAAGGAAAGAACAATCCAGTATTGAAACAGGCGAAAGAAATATTAAATAAAATTGAA
TTACCTATGAATTAA
Protein sequence:
MEPDNTQSVEIQTVENEASIKSTTADHEDSALAANSTNGNDTDVGTQPPNSKDIQKPSPK
KPKKRKPKIPRDVTAPRQPLTGYVRYLNERRDQLRAEQPELGFAELTRQLASEWSKLPTE
EKQHYLDAADQDKERYIKEWAEYKKTDAYKEFRKQQMEQKDTGTVTKKVKSCVDNNIISV
TGGATQISAEPVVGGNISTGSILSATRQQTPPRPRPCITPASGEEMSGDTDIPIFTDQFL
QHNKLRESELRQLRKANSDYEQQNAILQRHAEEVSAATARLRAETTAAAERTALLVAHRR
LLVTSLVQALQSVVLPLQNGPAGASESNIEEYMEKLQSLVTEGKNNPVLKQAKEILNKIE
LPMN