DPGLEAN20769 in OGS1.0

New model in OGS2.0DPOGS207793 
Genomic Positionscaffold2726:+ 13076-15016
See gene structure
CDS Length762
Paired RNAseq reads  3650
Single RNAseq reads  11205
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA005323 (8e-64)
Best Drosophila hit  Aly (2e-41)
Best Human hitTHO complex subunit 4 (8e-35)
Best NR hit (blastp)  ALY [Bombyx mori] (2e-91)
Best NR hit (blastx)  ALY [Bombyx mori] (2e-62)
GeneOntology terms







  
GO:0003713 transcription coactivator activity
GO:0003729 mRNA binding
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0005654 nucleoplasm
GO:0031965 nuclear membrane
GO:0000398 nuclear mRNA splicing, via spliceosome
GO:0071011 precatalytic spliceosome
GO:0071013 catalytic step 2 spliceosome
InterPro families
  
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding, alpha-beta plait
Orthology groupMCL12088

Nucleotide sequence:

ATGGTTGATAAAATTGATATGGCTTTGGACGACATAATAAAAGCGGGCAAAAAGGGAAGA
CCGGGAGGCGGTGGAGCTGGAAGAAAATTCGATGTTAAACGCCCAGGAAGAGGAGGTGGA
TTCCGTAACGGACGTACAGGTGGAGTGTTACGTGGTCGAAATCGTGGAGGAGTATCTAAG
CCAACAAATTATACAAGGGGAGATGTAAACAGCACTTGGAAACATGACATGTACAATGAC
TTCAATGATAGAAAAATCCAGAGGAGTGTGCCTCTAACCACAGGGCCCACAAAACTCCTT
GTGTCCAATCTGGACTTTGGAGTTTCAGATTCTGACATACAAGAGCTTTTCTCGGAGTTT
GGCATTCTTAAGAGTGCAGCAGTACATTATGATAGATCAGGAAGATCATTAGGCACAGCT
GATGTTCTGTTTGAAAGAAGAGCAGATGCATTAAAGGCTATGAAGCAATACAATGGAGTA
CCATTAGATGGGCGTGCAATGAATATACAACTAGCAACCTCAGAAATATCAACCTTTAGG
AATGAAGAAAGAAGTAGACCAGCTGGTGGCGGCAGTGTTGGTCCTGTAAGAAGAAATTCT
AACAGAGGAGGCGGTGGTAATCGTCCTCAAGTTGGTGGCAGGGGCAGAGGTGCACGACGT
GGAGGTCGTGGTGGAACAGGCGGACCTCGTGGCAAGAAAGCCGTACCAACAGCAGAACAA
TTAGATGCTGAACTAGATGCTTATGTTAAAGAAATTAAGTGA

Protein sequence:

MVDKIDMALDDIIKAGKKGRPGGGGAGRKFDVKRPGRGGGFRNGRTGGVLRGRNRGGVSK
PTNYTRGDVNSTWKHDMYNDFNDRKIQRSVPLTTGPTKLLVSNLDFGVSDSDIQELFSEF
GILKSAAVHYDRSGRSLGTADVLFERRADALKAMKQYNGVPLDGRAMNIQLATSEISTFR
NEERSRPAGGGSVGPVRRNSNRGGGGNRPQVGGRGRGARRGGRGGTGGPRGKKAVPTAEQ
LDAELDAYVKEIK