| New model in OGS2.0 | DPOGS208864 |
|---|---|
| Genomic Position | scaffold159:- 10826-11599 |
| See gene structure | |
| CDS Length | 774 |
| Paired RNAseq reads | 149 |
| Single RNAseq reads | 633 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008095 (8e-106) |
| Best Drosophila hit | CG31549 (7e-85) |
| Best Human hit | L-xylulose reductase isoform 1 (7e-24) |
| Best NR hit (blastp) | short-chain dehydrogenease/reductase-like [Bombyx mori] (1e-110) |
| Best NR hit (blastx) | short-chain dehydrogenease/reductase-like [Bombyx mori] (3e-106) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0055114 oxidation reduction |
| InterPro families | IPR002198 Short-chain dehydrogenase/reductase SDR IPR020842 Polyketide synthase/Fatty acid synthase, KR IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase IPR020904 Short-chain dehydrogenase/reductase, conserved site |
| Orthology group | MCL11858 |
Nucleotide sequence:
ATGTTCGCAAATAAAGTTGTTATTGTCACTGGTGCTAGTTCTGGAATTGGGGAGGAAACT
GCAGTTGAGTTTTCAAAACAAGCTGCTACTGTTGTTATAACAGGGAGAAACAAGGAAAAA
CTAGAAAAAGTTGTTTTAAGGTGTCAAGATGTTTCTCCGCTTAAGATGAAACCTTTACTA
ATAATTGCCGATTTAAATGATGAACATGATGTGGAGACTATAATTAATAACACAATATGT
AATTTTAAGAAGATTGATGTTTTGGTCAACAATGCTGGTGTTTTGGAAGCTGGTACTATA
GAAAATACTTCACTAGAGCAATATGACAGAGTTATGAATACGAATGTTCGCAGTCAATAT
CATTTGACAATGCTGGCCGTTCCGCATCTTATAAAAACTAAAGGGAACATTGTGAATGTT
TCCAGTGTAACTGGAATGAGGTCATTTCCTAATTGTCTCGCCTACTGCATGTCTAAAGCT
GCATTGGATCAATTCACTAGATGCATTGCTCTCGAGCTAGCACCAAAGGGAGTAAGGGTC
AATGCTGTAAATCCTGGTGTTATAAGAACAGGCCTACACAAGAAAGGGGGTATGAGTGAA
GAGGAATATGAGGCGTTTTTAAATAAGTGTGCACAAACACATGCTCTGGGTAGACCTGGT
GAAGCAAGTGAAGTTTCAGCAGTGATTGCTTTTCTGGCTGGTGATGGAGCAAGCAACATA
ACCGGAGCCTCACTGCCTATTGATGGTGGTCGTCATGCGATGTGTCCAAGATAG
Protein sequence:
MFANKVVIVTGASSGIGEETAVEFSKQAATVVITGRNKEKLEKVVLRCQDVSPLKMKPLL
IIADLNDEHDVETIINNTICNFKKIDVLVNNAGVLEAGTIENTSLEQYDRVMNTNVRSQY
HLTMLAVPHLIKTKGNIVNVSSVTGMRSFPNCLAYCMSKAALDQFTRCIALELAPKGVRV
NAVNPGVIRTGLHKKGGMSEEEYEAFLNKCAQTHALGRPGEASEVSAVIAFLAGDGASNI
TGASLPIDGGRHAMCPR