| New model in OGS2.0 | DPOGS205619 |
|---|---|
| Genomic Position | scaffold286:- 124905-126869 |
| See gene structure | |
| CDS Length | 1116 |
| Paired RNAseq reads | 339 |
| Single RNAseq reads | 890 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001131 (1e-147) |
| Best Drosophila hit | Rrp45 (7e-51) |
| Best Human hit | exosome complex exonuclease RRP45 isoform 2 (3e-66) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP002348-PA [Tribolium castaneum] (8e-90) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002348-PA [Tribolium castaneum] (2e-87) |
| GeneOntology terms | GO:0003723 RNA binding GO:0006396 RNA processing GO:0000175 3'-5'-exoribonuclease activity |
| InterPro families | IPR001247 Exoribonuclease, phosphorolytic domain 1 IPR020568 Ribosomal protein S5 domain 2-type fold |
| Orthology group | MCL15796 |
Nucleotide sequence:
ATGAGGGATCTTTATTTATCGAATTGTGAAAAGAATTTTATTCAAAAAATTATTTCGGAA
GGGCATCGATTAGATGGCAGAATTTACAATGAGAGCCGAAAATTAGATATATCATATGGA
TCAGAATATGGCAGTTGTATTGTTTCTTTAGGAGAAACTAAGATATTAGCCCAAGTATCA
TGTGAAGTAGTACAGCCTAAGCAAATAAGGCCCAACGAAGGTATTCTATTTATTAATGTA
GAAATAAGTCCTATGGCCGCACCACAGTTTGAGGCCAACAGACAGACAGATCTTACAGTT
TATCTTAACAGACTTTTGGAGAAGTGCTATAAAGACTCTAAATGTATAGATTTAGAATCC
TTATGCATTGTTGTAGAAGAGAAGGTGTGGTCATTAAGAGTAGATATAAAAGTTTTAAAT
CATGACGGAAACTTAATTGAATGTGCCAGCATCGCTACACTAGCATCATTGGCCCATTTT
AAAAGACCCGATGTAACTCGTAGTGGAGATAGTATTATAATTCACACATTATCTGAAAAA
GACCCCATACCTACCGTCTTATACCACTACCCTGTTTGTGTAACTTTTGCTATATTTAAT
AACAATATTCTAGTATCGGACCCTAGTTTTATAGAAGAATCAGTGTGCACAAGTAACTCT
GAGGAAGGCAGTACAGGAGGATTGCTAGTCGTTGGAATGAATCAGTATAAGGAGTTGTGT
GTATTGAATCTAAGTGGTGCTGCTATATATAATTCAAATGTTGTGCATAAAGCCATACTT
AATGCGGCTGAGAAGTGTAAGAATATTGTCGAAGAGGTTAAGAGTAAAATTGTTACCGAT
GATAATTTTAGGCAAAAACGTGTTAAGATCAATTTCGCCGATATTATTACAACAGATCAC
ATACAGACACTGTGTAAGAAGGATCTTAGTATTTGTCTTAAAAATTTTAAAATCAATGAT
GTGAAACAAGAGGACGATTCGGAAATGTCAGAGGATAATGTAACAGAAGACAGTAAATAC
GACGTTGTAGCAACAAAGCCAAATGTAGCTGAAATTAAGTCCAAGGAAGCTAAATCGTCG
TGGATAGAAATATCATCAGAATCTGAAGAAGATTAA
Protein sequence:
MRDLYLSNCEKNFIQKIISEGHRLDGRIYNESRKLDISYGSEYGSCIVSLGETKILAQVS
CEVVQPKQIRPNEGILFINVEISPMAAPQFEANRQTDLTVYLNRLLEKCYKDSKCIDLES
LCIVVEEKVWSLRVDIKVLNHDGNLIECASIATLASLAHFKRPDVTRSGDSIIIHTLSEK
DPIPTVLYHYPVCVTFAIFNNNILVSDPSFIEESVCTSNSEEGSTGGLLVVGMNQYKELC
VLNLSGAAIYNSNVVHKAILNAAEKCKNIVEEVKSKIVTDDNFRQKRVKINFADIITTDH
IQTLCKKDLSICLKNFKINDVKQEDDSEMSEDNVTEDSKYDVVATKPNVAEIKSKEAKSS
WIEISSESEED