New model in OGS2.0 | DPOGS205678  |
---|---|
Genomic Position | scaffold286:+ 128799-133947 |
See gene structure | |
CDS Length | 1317 |
Paired RNAseq reads   | 258 |
Single RNAseq reads   | 644 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001026 (3e-152) |
Best Drosophila hit   | ionotropic receptor 76b (1e-86) |
Best Human hit | glutamate receptor 4 isoform 1 precursor (6e-17) |
Best NR hit (blastp)   | GJ11565 [Drosophila virilis] (1e-96) |
Best NR hit (blastx)   | GF25213 [Drosophila ananassae] (2e-93) |
GeneOntology terms    | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0004970 ionotropic glutamate receptor activity GO:0016020 membrane |
InterPro families   | IPR001320 Ionotropic glutamate receptor |
Orthology group | MCL16403 |
Nucleotide sequence:
TTGGGTGATCGCAGATCAGAGGACTCTTTGTTAGGCCTCGTCAATAGCAGTAAAATTGAT
ATGGCGGCAGCGTTTTTCCCAATCCTGTTAAAGTACAACGAGATGGTGACGTACTCTGAT
GATCTGGACGAGGGCGTGTGGATGATGATGTTGAAAAGACCGAAGGAATCAGCGGCGGGC
TCTGGACTCCTAGCGCCGTTTGATACTTACGTTTGGTATTTGATTCTCGCTGCGGTTCTA
ACGTACGGTCCATTCATTACTCTCATAACGTGGATCCGATCAAAGTTGATTGAAAACGAC
GAAGGCTACATTTCTCTCTCACCGAGCGCGTGGTTTGTGTATGGAGCGTTCATAAAGCAG
GGAACGTCTTTGTCACCGGAGGCTAATACTACAAGAGTTTCTTTCGCCACCTGGTGGTTG
TTTGTGATGCTGCTATCAGCTTTCTACACAGCCAACCTGACAGCATTTCTTACTTTATCC
AAATTCACTCTGGATATAGAGAATCCTATAGATTTATATAAGAAGAACTACAGATGGGTG
ACCTCAGAAGGCGGAGCCGTGCAGTATACTATTAAAAACCCGGAGGAGGATCTGTATTAC
TTAAATAAAATGATTCTCAATAGGCGAGCTCAGATTCGTTCGGTGAACGATAACAAAGAG
TTCCTACCGATGGTGACAGGTGGCGCTGTGTTGGTCAAAGAACAGACGGCTGTCGATGAG
CTCATGTACAGCGATTACTTGAACAAGACCAGGAAAGGAGTTCCGGAAACCCAGAGGTGC
ACGTACGTCATGGCACCGAATCCGTTCATGAAGAAACAAAGAGCCTTCGCCTATCCCAAG
AACAGCACGTTGAATAAATTATTTGATACAGTACTGAAGTATTTAATCCAGTCCGGTATA
GTGGATCACCTCGAGCGCCGCGACCTCCCCAGCACGAGGATCTGTCCCCTGGATCTCCAG
TCCAAGGACAGACAGCTTCGTAACGCTGACCTCATGATGACGTACTTTATAATCATAACG
GGACTATCGATTGCTTCTGTGGCTTTTGTTTCAGAGTTAATCGTAACACGATATTATAAA
GGAAAAGATAAAGATGTGACGCAGAAGACGAAAACAGGCAAAGCCTTGAAAATGTTGAAG
AAAGACGACGGCGGACCGCCTCCTTACGACTCACTTTTCGGCAAATCAAGATACAAAATT
AACGAAAATTTAGATACAAGAATTATAAACGGTCGAGAATATTATGTTGTGCATAATAAG
AATGGCGACACGAGGCTGATACCTGTGAGGTCTCCGTCGGCGTTTCTTTATAGATAA
Protein sequence:
LGDRRSEDSLLGLVNSSKIDMAAAFFPILLKYNEMVTYSDDLDEGVWMMMLKRPKESAAG
SGLLAPFDTYVWYLILAAVLTYGPFITLITWIRSKLIENDEGYISLSPSAWFVYGAFIKQ
GTSLSPEANTTRVSFATWWLFVMLLSAFYTANLTAFLTLSKFTLDIENPIDLYKKNYRWV
TSEGGAVQYTIKNPEEDLYYLNKMILNRRAQIRSVNDNKEFLPMVTGGAVLVKEQTAVDE
LMYSDYLNKTRKGVPETQRCTYVMAPNPFMKKQRAFAYPKNSTLNKLFDTVLKYLIQSGI
VDHLERRDLPSTRICPLDLQSKDRQLRNADLMMTYFIIITGLSIASVAFVSELIVTRYYK
GKDKDVTQKTKTGKALKMLKKDDGGPPPYDSLFGKSRYKINENLDTRIINGREYYVVHNK
NGDTRLIPVRSPSAFLYR