| New model in OGS2.0 | DPOGS215273 |
|---|---|
| Genomic Position | scaffold9017:- 3348-6711 |
| See gene structure | |
| CDS Length | 1635 |
| Paired RNAseq reads | 237 |
| Single RNAseq reads | 665 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008839 (0.0) |
| Best Drosophila hit | CG8503 (8e-106) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to CG8503 CG8503-PA [Tribolium castaneum] (9e-134) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC005992 [Tribolium castaneum] (6e-138) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0016481 negative regulation of transcription GO:0005737 cytoplasm GO:0016564 transcription repressor activity GO:0005634 nucleus |
| InterPro families | IPR002893 Zinc finger, MYND-type |
| Orthology group | MCL17850 |
Nucleotide sequence:
ATGGCAGTGGAGGAGCCTTGCGAAGTATGTTTGACGCCAACAGAGCAAAAGTGTTCAGGG
TGTCAGATAGTCCATTATTGTTCGAGGGACCATCAAAAACGACATTGGAAGCTACACAAG
CTTCATTGTGTTCCAGCCAAGATCAAAGAACTTCCCGGCATAGGGAGATATCTTGAGGCA
ACAAGAACTATAAAGGCCGGCGATGTTATAATGAAAGAAGCTCCTCTTATTACTGGTCCA
GCTCAAATAACCCCACCAGTGTGTCTGGGGTGCTACGTGTTATTGGAAGAGGGTAAAACG
ACGCGTTGTGATAAGTGCGGCTGGCCATTTTGTTCTGAAAAGTGTACCCATAGTTCAGTT
CATGAGCCAGAATGTTTTTATACCCAACAAAGAGGTGAAAAGGTGTCGATATCAACGTAT
GGAATACCACATCCTAATTACCAATGTGTCACGGTATTACGGTGCTTGTACCAACGAGAT
CACAACATGAAGCTGTGGAATAAGCTGCAAGCACTGGAGACACATACAGAGGATAGGAAG
GGCACTGATAAGTGGGAAAACGATAGAAAGATGGTAGCACAGTTTATTTGGAGCTTTTTC
AAATTGGAACGCCTATTCAATGAGGAAGAGATTATGAAATGCTGTGGTATTATTCAGATT
AACGGCCACGAGGTACCGCTTCTTGAACCGGAATATGTGGCTGTATTTGACAAAATTTCT
ATGGTAGAGCACAATTGTAGGGCCAATTGTAACAAAAGCTTCACCTCTAATGGCGAAATC
ATCCTTAGTGCTGGTGTTGCCATTCCTCGAGGCTCCCATATATCTGTCTGCTACACGGAC
CCGCTTTGGGGCACGGAAGCGCGCCGACACCATCTCTCCGATTCTAAATTTTTTGAGTGC
TCTTGCGAGAGATGCTCTGATGTCACCGAGTTCGGAACCATGTTTAGTGCTGTGAAGTGT
AAAAAGAAAAATTGTAAAGGATATCTTTTACCAGACACATTCATTCTACCAATTTTACAT
AAAACTATATCACCGGATCCCGCAACTAGAGGATTGGATAATAAGTTTTGGAAATGCAAA
GAGTGTAAGGATGAGGTTTCAGATGAAATTATACAGCAACTGCTTCAAGATATAGGAAGA
GAATTGAGCATTATGGAGAAAGGGAATCCAGATGCATGTGAGAGGTTTATAGAGCACTGT
GCAACCTACTTACATCCTTCACACTACTACATGATAGATGCAGGACTAGCGCTGGCACAG
CTGGTGGGTCAAGACACAGGTCTAGCAGTTGTCTCAGACGATCGACTGCTGCTCAAAACG
CAGCTGTGTCGGAAGATCACCGAGTTGTTGAATATCTTAGCGCCAGCTGAGAGCAGGGTA
CGCGGCTCCCTCCTGTTCGAGTTACACGCGGCCGTGGCTGAAACCGGACGAAGGAAAGGT
CTTGTGGAAGGACCCAACGTCATGCTGGGATACATTTTGGAGTCGCAGAAAATCCTGGTG
GAGTCATCAGCATTGCTGGCACACGAACCACCAGAGTTACCTGAAGGCCGCCTGGGAAGA
CAGGCGAAAGTAAACCTGGTGCAGATGGACGAGCTTATTAGGAATTTATCCGCAGCCCTG
CCCTCGCCTATATAA
Protein sequence:
MAVEEPCEVCLTPTEQKCSGCQIVHYCSRDHQKRHWKLHKLHCVPAKIKELPGIGRYLEA
TRTIKAGDVIMKEAPLITGPAQITPPVCLGCYVLLEEGKTTRCDKCGWPFCSEKCTHSSV
HEPECFYTQQRGEKVSISTYGIPHPNYQCVTVLRCLYQRDHNMKLWNKLQALETHTEDRK
GTDKWENDRKMVAQFIWSFFKLERLFNEEEIMKCCGIIQINGHEVPLLEPEYVAVFDKIS
MVEHNCRANCNKSFTSNGEIILSAGVAIPRGSHISVCYTDPLWGTEARRHHLSDSKFFEC
SCERCSDVTEFGTMFSAVKCKKKNCKGYLLPDTFILPILHKTISPDPATRGLDNKFWKCK
ECKDEVSDEIIQQLLQDIGRELSIMEKGNPDACERFIEHCATYLHPSHYYMIDAGLALAQ
LVGQDTGLAVVSDDRLLLKTQLCRKITELLNILAPAESRVRGSLLFELHAAVAETGRRKG
LVEGPNVMLGYILESQKILVESSALLAHEPPELPEGRLGRQAKVNLVQMDELIRNLSAAL
PSPI