| New model in OGS2.0 | DPOGS208730 |
|---|---|
| Genomic Position | scaffold338:- 77698-82774 |
| See gene structure | |
| CDS Length | 2496 |
| Paired RNAseq reads | 1379 |
| Single RNAseq reads | 3746 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003395 (0.0) |
| Best Drosophila hit | HBS1 (0.0) |
| Best Human hit | HBS1-like protein isoform 1 (2e-156) |
| Best NR hit (blastp) | eukaryotic peptide chain release factor GTP-binding subunit [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | eukaryotic peptide chain release factor GTP-binding subunit [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0006415 translational termination GO:0003747 translation release factor activity GO:0005829 cytosol GO:0003924 GTPase activity GO:0005525 GTP binding |
| InterPro families | IPR006762 Gtr1/RagA G protein IPR000795 Protein synthesis factor, GTP-binding IPR015033 Domain of unknown function DUF1916 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPR004161 Translation elongation factor EFTu/EF1A, domain 2 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel |
| Orthology group | MCL14795 |
Nucleotide sequence:
ATGCTCTGGAACTGCGCGGCCAGCTTTGAACAGGACAATTTAAACTGCTTAACAATGTTG
GAGACTTTCTCAAAGCGGTGGGCGTCTCGGTGCGGTCGTCGTTGGCAATGTGAAACTACT
AAGAAAGTAGCTCGCTCAAATAACAAGACCTGGTGGAATTATGTGTTGCTGATGGGTAAA
AGCGGATCAGGGAAGACCAGTATGAGATCCATTATATTTGCCAATTACATTGCAAGAGAC
ACCAGGAGGCTAGGAGCAACAATTGATGTGGAACACTCACATGTAAGATTTCTTGGGAAC
TTAGTCCTCAATTTATGGGACTGCGGTGGCCAGGAGGCTTTCATGGAGAACTACTTTGCA
TCACAAAGGGACAATATCTTCCGGAATGTTGAAGTACTGATATATGTGTTTGATGTCGAG
AGCAGGGAAATGGAAAAGGACATGCATTATTATCAGTCATGTCTCGAAGCTATTTTACAG
AAACGTGTGGAGTTCAGCGAAAACAATTATGATCCCATAAAATTAAGTGATAAGTCTAGT
TGGTTTAATATTACAATATGGCTCGCCACCGTAATCGATGCTGATCAGTGGATGTATGAT
CGGTCTCGTAATCAGCAGGCTATATCCAGCTTCCTGAGTAGCCATAATGATATTCAAGAA
GAATCCGAAGACCTGACTGAAGACTCGCACCCGTGCCTCCAGCGTCGCGAGTCCATAGAC
CTGCGAGGCCTTAACTTAAATGAAGAAGACGAGGCTAAGCTTATGTCATGTTTAGATGAA
TTGAGAAATGTATTGGGTGATACAGTCCCGGAAAATATCCTTGTGCAAGCAGTGATAAAT
CACAATTTCAATTTTAATATAGCTTTGGACGAAATTTTGAATAATAATAAGACTAAGGAT
GAAAAAACTAAGGCAGCTGTAACATTACCTGTTATATTGGAACCTGCTAAGACCCCTGTT
ATAACCACAGATGTCAAAGTTCCTAAGGTGATAGCTACAAAAGTTGAAACAAGCAAAGCG
AATGTGATTAAAGGTTTCAAAATTGATAGTCCTAAAAGTCTTCCACAAACACCTAGAGAA
CAATCCCCCGCTACCAGAGATAGGACACCATCCAGGACAGATCAAGTCGATGACAGCAAA
AGTGTCACAAAATTGAAGGAAAATAAAACAGATCCTAATGTACAGTATTCAAATGAACGG
AAATCAGATAAGGACCACTTGTATATTATTGTGATAGGTCATGTTGATGCCGGAAAATCA
ACTCTAATGGGCCGTATACTGTGTGATTTGGGTGAAGTGAGTCAAAGGACTTTGCATAAA
TATGAACAGGAGAGTAAGAAGCTCGGGAAACAAAGTTTCATGTACGCTTGGGTGCTCGAT
GAGACTGGTGAAGAACGATTGAGAGGTATCACAATGGATGTGGGTAGAGCTCAGTTTGAG
ACAAAAACAAAGAAGGTTATTATATTAGATGCCCCCGGCCACGCTGATTTCATTCCGAAC
ATGATAACGGGTGCTGGCCAGGCCGACGTCGCTTTGTTAGTTGTGGATGCAACACGAGGA
GAGTTTGAATCAGGTTTCGATCTTGGCGGACAAACACGAGAACATGCCTTACTTGTTAGA
TCATTAGGTGTTAATCAGCTTGCGGTGGCAGTCAACAAATTAGATACAAATAATTGGTCC
CAAGAAAGATTTAACGAGATAACTACGAAACTAAAATCTTTTCTTAAACAAGCTGGCTTC
AAAGATTCAGACGTCACATATGTACCATGTTCAGGTTTGACCGGTGAGAACCTGGTTAAG
TCTACTACTGAAGTGGAACTACTCAAATGGTACGATGGCCCATGTCTTCTTGACGTTATC
GACAAGTTTAAAGTACCCCAGAGGCCTGTCGCTAAGCCTCTACGTATGTCCATTAACGAC
GTATTCAAGGGAACCGGATCCGGTTTCTGTGTTGCTGGACGCATAGAGACAGGAGTAATC
AACAAGGGAGATAAAGTTCTACTCTGCCCGACCAAGGAAATGGCGGAGATTCGTAGTGTA
AGTATAAATGATATGGTCAGCAACGTGGCATTCGCTGGTGATCAGGTCAGTGTGACACTG
TCAGGGGTGGAAATGCAGAATGTTTCGATTGGATACGTTTTGAGTGATCCCGTACAGCAG
GTGCCGGTGGCTGCGAGGTTTGAGGCCCGTTTGGTAGTTTTCAACGTCAAGGTGCCAATA
ACTAAAGGGTTCCCGGTCTTAATACATCACCAGTCTTTGGTGGAATCGGCTAGCATAGTC
AAACTTAAGGCGTTACTGAATAAAAGTACGGGTGAGGTCCTGAAGAAGAAGCCAAGATGT
CTGGGCAATAATTCTGTAGCTGTAGTGGAAATAGAAGTTTGTAGACCGATTTGTATCGAA
CGGTACAAAGATGTTAAGGAATTGGGTCGGGTCATGCTACGTGTTGCCGGAGTCACTATA
GCTGCTGGTCTCGTAACAGATATCCTGAGCATTTGA
Protein sequence:
MLWNCAASFEQDNLNCLTMLETFSKRWASRCGRRWQCETTKKVARSNNKTWWNYVLLMGK
SGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFA
SQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQKRVEFSENNYDPIKLSDKSS
WFNITIWLATVIDADQWMYDRSRNQQAISSFLSSHNDIQEESEDLTEDSHPCLQRRESID
LRGLNLNEEDEAKLMSCLDELRNVLGDTVPENILVQAVINHNFNFNIALDEILNNNKTKD
EKTKAAVTLPVILEPAKTPVITTDVKVPKVIATKVETSKANVIKGFKIDSPKSLPQTPRE
QSPATRDRTPSRTDQVDDSKSVTKLKENKTDPNVQYSNERKSDKDHLYIIVIGHVDAGKS
TLMGRILCDLGEVSQRTLHKYEQESKKLGKQSFMYAWVLDETGEERLRGITMDVGRAQFE
TKTKKVIILDAPGHADFIPNMITGAGQADVALLVVDATRGEFESGFDLGGQTREHALLVR
SLGVNQLAVAVNKLDTNNWSQERFNEITTKLKSFLKQAGFKDSDVTYVPCSGLTGENLVK
STTEVELLKWYDGPCLLDVIDKFKVPQRPVAKPLRMSINDVFKGTGSGFCVAGRIETGVI
NKGDKVLLCPTKEMAEIRSVSINDMVSNVAFAGDQVSVTLSGVEMQNVSIGYVLSDPVQQ
VPVAARFEARLVVFNVKVPITKGFPVLIHHQSLVESASIVKLKALLNKSTGEVLKKKPRC
LGNNSVAVVEIEVCRPICIERYKDVKELGRVMLRVAGVTIAAGLVTDILSI