| New model in OGS2.0 | DPOGS208715 |
|---|---|
| Genomic Position | scaffold338:+ 130321-137206 |
| See gene structure | |
| CDS Length | 3282 |
| Paired RNAseq reads | 18068 |
| Single RNAseq reads | 46453 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003361 (0.0) |
| Best Drosophila hit | karyopherin beta 3 (0.0) |
| Best Human hit | importin-5 (0.0) |
| Best NR hit (blastp) | Karyopherin beta 3 [Papilio xuthus] (0.0) |
| Best NR hit (blastx) | Karyopherin beta 3 [Papilio xuthus] (0.0) |
| GeneOntology terms | GO:0006606 protein import into nucleus GO:0005643 nuclear pore GO:0008320 protein transmembrane transporter activity GO:0005829 cytosol GO:0005488 binding GO:0005875 microtubule associated complex |
| InterPro families | IPR000357 HEAT IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical |
| Orthology group | MCL11678 |
Nucleotide sequence:
ATGGCAGGAGACCAGGCTCAATTTTATCAATTATTAAATACAATATTGTCTATAGATAAT
GAAACCAGATCACAAGCAGAGAAATTATATAATGATATACCAACCGAAACGAAGGTAGTC
CACTTAGTTGGTGCTATCCAAAATGCAGACCTCGGCGAGGAAGCCAGAGAAACCGCAGCA
GTACTCCTGCGAAGGTTGCTCAGCGCCGAGTTTTTTGAATTCTTCCCTAAACTCCCTTTT
GATCAGCAAGCAATGCTTAGAGAACAGTTGTTGCTCACTCTGCAAATGGATGTTAGTCAA
CAGCTAAGACGAAAAATTTGCGATGTTGTATCTGAGCTAGCAAGAAATCATATAGATGAT
GATGGAGTCAACCAGTGGCCGGAATTCCTTCAATTCATGTTCAACTGTGCGAGTGCGCAA
GATCCTAACATTAAAGAGGCTGGGATTAGAATGTTCACATCTGTGCCAGGTGTTTTTGGT
AATCGTCAGAATGAAAATCTGGATGTTATTAAGAGAATGTTGCTGTCAACACTCCAACCG
ACGGAATCAGAGGCACTGCAGATGCAGGCTGTTAAAGCCGTCGGAGCTTTTATCCTGCTC
CATGATAAAGAACCAGCCATACAGAAACATTTTAGTGATCTCCTTGTACCTTTTATGCAG
GTTGTAGTACAATCAATTGAGAAGGCCGATGATGATGCAGCCCTAAAAGTTCTTATTGAA
CTTGCTGAATCTGCTCCTAAATTCTTGAGACCACAAGTTCAAACAATCTTTCAAGTTTGC
ATAAAGGTTATTGGGGACAAAGATGGCGAGGACAACTGGCGGCAGTTGGCATTAGAAGCA
CTAGTGACATTATGTGAGACAGCCCCAGCAATGGTCAGGAAAGTAGTTCCTAATGCCATA
CAACTACTGACCCCACTCATACTAGATATGATGTGCGAGTTAGAAGAGGAACCTGATTGG
GCTGTGCAGGATAATGCCTCTGATGATGACAATGAATTAAACTATGTCGCAGCAGAATCT
GCCTTAGACCGTATGTGTTGTGGTCTTGGTGGCAAGATAATGCTTGGTCTGATTGTGGGA
CAAGTGCCTGAAATGTTGAACTCTCAAGACTGGAAGAGGAGGCATGCCGCCTTAATGGCA
GTATCTTCAGCTGGGGAAGGCTGTCACAAACAAATGGAACAAATGTTAGATCAAGTTGTT
TCAGCGGTGCTCAACTATCTAACAGACCCCCATCCGCGAGTGCGTTATGCTGCTTGCAAT
GCTGTGGGGCAAATGTCAACGGACTTTGCACCGGTGTTTGAGAAGAAATTCCATGACAAA
GTGGTTCCCGGACTTCTTATGGTACTAGAAGACAATGCTCATCCAAGAGTACAGGCTCAT
GCAGCAGCAGCCCTGGTTAACTTCAGTGAAGATTGCCCCAAGCAAATCTTAACTCAATAC
TTGGGACCACTCATGGGTAAACTGGAAGCAATTTTAACTGCTAAATTCAAGGAGTTGGTA
GAGAGTGGCACCAAGCTTGTACTAGAGCAGATAGTGACCACGATTGCTTCAGTTGCTGAT
ACTGTGGAAAAAGAGTTTGTGGAATATTACGACAGGCTGATGCCCTGTCTTAAATATATC
ATTGCCAATGCCACTACTGACGAATTCAAAATGCTTCGCGGCAAGACTATTGAGTGTGTC
AGTCTGATAGGCTTGGCTGTTGGTGAAGAGAAATTTATGGCGGATGCATCAGAAGTGATG
GACATGCTTCTTAAGACACACTCGGAAGGTGATCAACTGCCGGCCGATGACCCCCAGACT
TCTTATCTTATCTCTGCGTGGTCGCGAATTTGCAGAATTATGGGCAAAAAATTCGCTCAG
TATTTACCGATGGTAATGGAGCCGGTGATGCGCACCGCTGCTATGAAGCCGGAAGTAGCT
TTATTAGATAACGACGACCTCGAGATCATCGAGGGAGAACTTGACTGGCACTTTGTAACC
TTAGGAGAGCAACAGAACTTCGGCATAAAGACTGCAGGACTTGAAGATAAAGCGTCCGCC
TGCGACATGTTGGTCTGTTACGCCCGAGAATTGAAGGAGGCCTTCGCTGAATACGCCGAA
GATGTTGTTAAGCTAATGGTGCCGATGTTGAAGTTTTACTTCCACGACAACGTGCGCACA
GCCGCCGCAGAGTCTTTACCTTATCTACTGGAATGTGCGCGAATCCGCGGCCCGCAGTAC
ATTCAGGGCATGTGGGCGTACATCCTGCCCGAATTATTGAAGGCCATCGAGTCCGATCCA
GAACAAGATGTCCAAGTGGAACTGCTGAACAGCCTTGCTAAGTGCATCGAACTCTTGGGA
ACGGGATGTCTGTCTGACGAATCTATGTCTGAAGTGTTGCGCATCCTCAACAAACTACTC
GCAGAGCATTTCGAGCGTGCTACTCAACGCAGACAAAGGCTCGCCGACGAAGATTACGAT
GAGGTTGTAGAAGAACAACTAGCGGATGAAGATAACGAAGATGTATATGGCCTGTCCCGA
GTGGCCGACGTGTTACACGCGCTTATGTCCGCCTACCATGAAAACTTCTACCCTCACCTA
GACTCGCTGGTTCCTTATCTTGTACAACTCCTTGGCCCCGGACGTCCATACGCCGACCGA
CAATGGGCTATTTGCATTTTCGACGATGTCATCGAATTCGGCGGTCCCGCCTGCGTGAAG
TATCAAGATGTCTTCTTGGAGCCGATGTTGAATGGTCTACGTGAGCCTCAGCCGGAAGTG
CGACAAGCCGCTGCCTACGGTTGTGGAGTGTTAGCCCAATTCGGGGGACCAAATTTTGCG
GCCGCCTGCGCTCGAGCCGTTCCACTGCTAGCCGCCCTCATCGCCGAGCCAGACTCGCGT
TCCGTGGAAAACCTGAACGCTACCGAAAACGCTATCTCTGCTGTTACGAAAATTATAAAA
TACAATCATTCGCAAATCAATAGGGATGAAATCATCAGGCACTGGTTGACCTGGCTCCCA
GTGGTTGAGGACACAGAGGAGGCGCCACATGTATACTCGCTGCTGTGTGAACTGGCAGCC
GGCGGCCACCCAGCTCTCGCTACACCGGACGCGCCTCGACACGTGATCGCTACACTAGCC
GAAGCCTTCCTGAGAGACGCCGTGCCAAACGATAATCCTGTGTACGCGCAGATGGTCGCT
CTCGTCAGGCAAATACAGACGAATGCGGAGCTTTTCAATTCTTGCTTGATGCAATTGAGT
AACGACCACAAGGAAGCTCTCAAAGTGGCTCTGCTGACCTAG
Protein sequence:
MAGDQAQFYQLLNTILSIDNETRSQAEKLYNDIPTETKVVHLVGAIQNADLGEEARETAA
VLLRRLLSAEFFEFFPKLPFDQQAMLREQLLLTLQMDVSQQLRRKICDVVSELARNHIDD
DGVNQWPEFLQFMFNCASAQDPNIKEAGIRMFTSVPGVFGNRQNENLDVIKRMLLSTLQP
TESEALQMQAVKAVGAFILLHDKEPAIQKHFSDLLVPFMQVVVQSIEKADDDAALKVLIE
LAESAPKFLRPQVQTIFQVCIKVIGDKDGEDNWRQLALEALVTLCETAPAMVRKVVPNAI
QLLTPLILDMMCELEEEPDWAVQDNASDDDNELNYVAAESALDRMCCGLGGKIMLGLIVG
QVPEMLNSQDWKRRHAALMAVSSAGEGCHKQMEQMLDQVVSAVLNYLTDPHPRVRYAACN
AVGQMSTDFAPVFEKKFHDKVVPGLLMVLEDNAHPRVQAHAAAALVNFSEDCPKQILTQY
LGPLMGKLEAILTAKFKELVESGTKLVLEQIVTTIASVADTVEKEFVEYYDRLMPCLKYI
IANATTDEFKMLRGKTIECVSLIGLAVGEEKFMADASEVMDMLLKTHSEGDQLPADDPQT
SYLISAWSRICRIMGKKFAQYLPMVMEPVMRTAAMKPEVALLDNDDLEIIEGELDWHFVT
LGEQQNFGIKTAGLEDKASACDMLVCYARELKEAFAEYAEDVVKLMVPMLKFYFHDNVRT
AAAESLPYLLECARIRGPQYIQGMWAYILPELLKAIESDPEQDVQVELLNSLAKCIELLG
TGCLSDESMSEVLRILNKLLAEHFERATQRRQRLADEDYDEVVEEQLADEDNEDVYGLSR
VADVLHALMSAYHENFYPHLDSLVPYLVQLLGPGRPYADRQWAICIFDDVIEFGGPACVK
YQDVFLEPMLNGLREPQPEVRQAAAYGCGVLAQFGGPNFAAACARAVPLLAALIAEPDSR
SVENLNATENAISAVTKIIKYNHSQINRDEIIRHWLTWLPVVEDTEEAPHVYSLLCELAA
GGHPALATPDAPRHVIATLAEAFLRDAVPNDNPVYAQMVALVRQIQTNAELFNSCLMQLS
NDHKEALKVALLT