| Genomic Position | scaffold11441:- 1711-3109 |
|---|---|
| See gene structure | |
| CDS Length | 855 |
| Paired RNAseq reads | 138 |
| Single RNAseq reads | 1066 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001723 (2e-06) |
| Best Drosophila hit | CG17359 (1e-15) |
| Best Human hit | zinc finger protein 2 homolog (3e-19) |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-99) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (9e-98) |
| GeneOntology terms | GO:0005634 nucleus GO:0046872 metal ion binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR000477 Reverse transcriptase IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGTGTCCGAAAAGTTTCACTATGCCCTTGTTCCTACAGATTCACACTCGAACTCACACA
GGGGAGAGACCTTATGAATGTCAACACTGTCCGAAGGCGTTTAGCAACAAGGCAGCCTTA
TTAAGACATGACAGGGTCCACACCGGTGTAAAGCCCTATGAGTGTCCTCAGTGCGGTAAA
TTCTTTACTCAGTCTAATTCTATGAAGCTCCATGTGAGAACGGTGCACCTTAAACTGCCA
GCGCCTTACAAGAGTAAGAACAGGAAGGGGAAGTCTAGGAACGTAGGGGTCCACCAAGGC
TCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTGGACACTGTCTCGGCTAACATCCAG
GACCAGCCTCCATGGCTGATGATGTATGCCGATGACATAGCGCTCATTGATGAGAGCAGG
TTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTTAAA
CTAAATGTGACGAAGACCGAGTACATGGCTTGCGGAAGCCCGGACTCTTGCACTATCCAT
ATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTGCAT
GAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAATGG
CGTGAGGTCACAGGTGTGGTCTGCGATCGCAGAATACCTACCAAGCTCAAGGGAATAATA
TACAAGAGCATAATCCGACCGGTTCTCTTATATGGAAGCGAATGTTGGCCAACACTGTCC
AGGCACACTCAGGAGCTTCACGTCACGGAGATGAAGATGCTGAGGTGGATGTGTGGCGTA
ACGCGGGCGGGCTGA
Protein sequence:
MCPKSFTMPLFLQIHTRTHTGERPYECQHCPKAFSNKAALLRHDRVHTGVKPYECPQCGK
FFTQSNSMKLHVRTVHLKLPAPYKSKNRKGKSRNVGVHQGSALSPFLFNVVLDTVSANIQ
DQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIH
IGPEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWREVTGVVCDRRIPTKLKGII
YKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRAG