| New model in OGS2.0 | DPOGS215366 |
|---|---|
| Genomic Position | scaffold4337:- 823-3124 |
| See gene structure | |
| CDS Length | 495 |
| Paired RNAseq reads | 1589 |
| Single RNAseq reads | 3622 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009554 (2e-59) |
| Best Drosophila hit | CG5641 (8e-35) |
| Best Human hit | interleukin enhancer-binding factor 2 (1e-32) |
| Best NR hit (blastp) | interleukin enhancer binding factor [Bombyx mori] (4e-62) |
| Best NR hit (blastx) | interleukin enhancer binding factor [Bombyx mori] (4e-59) |
| GeneOntology terms | GO:0006955 immune response GO:0016740 transferase activity GO:0005524 ATP binding GO:0003725 double-stranded RNA binding GO:0030528 transcription regulator activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0005515 protein binding GO:0003677 DNA binding GO:0005634 nucleus GO:0005730 nucleolus GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR006116 2-5-oligoadenylate synthetase, N-terminal IPR006561 DZF |
| Orthology group | ND |
Nucleotide sequence:
ATGGTGCGTGGTGCCAGCAGAGGCGGACGTGGTATGCCGGGGAGAGCTGGAATGGGCCGC
CCGCCCTTTAATAGACCTCGCGTTTTAATGCTGAGGCCGCCCTTCGACTTGATCCTAGCT
GAACCATCCTTCCCCAGATGCAAACCAGCGCCTGACGACTCAGCGTTAACACAAGCTCTC
CTGAAGAGGCATGCTGAGTTATGTCCGACACCAGCAGAACAGTCTGCTGTACTCAGTCTC
GTCACCAAACTGCAGACAGTATTGGATAACCTGGTTGTAGCTCCCGGAGACTTCGCAGCA
TGTCAATTAGAGGAGGTGAGACAAGTCGGCTCATACAAGAAGGGGACGATGATGGCCGGC
AAGAACTTGGCTGATATAGTTGTCATAATGAAAACACTACCCACCAAGGAGGCTGTAGAG
GGCTTGTCTAATAAGTCGATAGATGTCGCTGACGGGTGGGTGAAATCATCCCTGCTTCAA
GTCCACAAAAAATAG
Protein sequence:
MVRGASRGGRGMPGRAGMGRPPFNRPRVLMLRPPFDLILAEPSFPRCKPAPDDSALTQAL
LKRHAELCPTPAEQSAVLSLVTKLQTVLDNLVVAPGDFAACQLEEVRQVGSYKKGTMMAG
KNLADIVVIMKTLPTKEAVEGLSNKSIDVADGWVKSSLLQVHKK