New model in OGS2.0 | DPOGS209028  |
---|---|
Genomic Position | scaffold1878:- 15670-22481 |
See gene structure | |
CDS Length | 3897 |
Paired RNAseq reads   | 115 |
Single RNAseq reads   | 274 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010029 (0.0) |
Best Drosophila hit   | CG14608 (2e-36) |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: similar to CG14608 CG14608-PB, partial [Acyrthosiphon pisum] (9e-42) |
Best NR hit (blastx)   | PREDICTED: similar to CG14608 CG14608-PB, partial [Acyrthosiphon pisum] (6e-39) |
GeneOntology terms    | GO:0006030 chitin metabolic process GO:0005576 extracellular region GO:0008061 chitin binding |
InterPro families   | IPR002557 Chitin binding domain |
Orthology group | MCL39228 |
Nucleotide sequence:
ATGCGGTGGAAGGAAGGCTTGGACATAAAAATGATTTCCTTAAAAACAATCTGTGTTTTA
GTCGCTTTAAATTTGGTGCAAACTTGTCACTGTGCTCGACAACTGGCGAATCGAAGAAAG
GATACATCGTCCTTGTATCTTCCCGAACCAAGTGCGCAGTCACTGACAGCGATCGCACAA
GCGATGGGAGCGGCGGGATTCGAAGACTACACGGAAGGAAAGACACTCGTCAAGCGACTG
ATAACGGCCGATGACCAGTCTGAGCTTGATGTTGTTGAACATATGGGTGTAATAGGAAAG
GCAGGTGTTGACTTCCCAGCTCTGCCCAATATCCCCAAAACCGGATTCAACTGCAAGAAC
GTGCCCACGGGTTATTATGCTGACTTGGAAACCGATTGTCAGGTATTCCATATCTGTGAC
ACGTCTCGCAAGATATCGTTCTTGTGTCCAAATGGCACCATCTTCAGTCAGTCGCATCTC
ATCTGTGACTGGTGGTTCAAGGTGGACTGTGCATCCGCACCGGCTCTGTACGAGGCTAGT
GTAGAGTACTACTCCAATGAACAAAAAAAGTCTCAGAAAGTAGGAAGAACTCTCTCCAAA
AACTCTAATAACCGAAATGTCGGTGCCGATTCTCAGGTTCGAACCGAATCTAGAAAAGCA
CCTATACCCTCGACAACAGAAAAACTTCTAAGACAGTCCCAAAATTCACAAACTAATGAA
CCTGTACCCACTGACGTTCCTACAACCAGAAACTATCAGACAATCTTTGATATTAATCCA
ACGTATGCTACCACTGAATTTGAAAACCGGAAAAAGAACCTCGTTCAGCTTATTTCAAAT
GATTTCAGCAACTATCCATCTAAAACAACTCTACCTGTATACGACTCAACAACCCGCAAA
ACTACTGAACCAGTATATGACCATAACAGCTTGAGGGAAATGCAAGTAGCTGCGGAAACA
GCTTCTTTTGCCCAAAACCAAAATCGACAATTTTTACAAGAATATAATAGTAAGAACCTC
AGACCATACCCTGTATATAACCATAATTTACAAGTCAAACCATCCAAAACTAAGACTCTT
ACCACTTTATATGATATAACAGCCACCAATGCTCCTCAATATACACAGCAAGCAACAACA
AAACGACAAACTTTACTACCTTACACCAAAAGTTACACAATTAACGATAATCGTGATCCT
TACACAAGGCCAGGAGTTTCTTTGCTAAGGGAGTTTCTAGAGAAGGAAAGAAATAAAACT
CTGCTTGCTACAACTGAAAAAATTGCTACAATTCGAAGCGATAAACAGAAAAGCAAAATA
AACCCGGAGAAAAAAGGAGAAACAGATAACAGGAGCAGTTTTGAATCTACTTCTAAAATA
CCATATACCAGTAAAACCGTTGGACAAACTGAAACTATTTTAAACGTGGAACATTCTACT
GAGCCAACGACGGAAATATCGTATAAAGATCGCAGGGAGAGATTATTAAGAAAAATTGCG
TTAGACAGAAAGGACGCAGAAACGACGCCGCCGACTGTTGTTACGGAAAAATATTATGGT
AACCAATCGAATAGACCCGGGCTTGTTGTACCACCATCACTAACTCCTAAAACGCTTCAT
TCGCTGGCTATATATTATGCCACAGCCTTAGATAATTTTGCTACAACACCCACACCTGAA
GATACCGAAACAACTACGTATTCTATGGATATGTATGAAAAAGTCACGGAAGGGTTGCCA
CCTTTATTTAGCAAGCAGACAATAACTAAATATGGTAATCTCTTTGGACTTGGAACAGGA
AACGACGAAATGCTTGAGAATATTAAAATAGACCCAAATAGCTCGATAAATGAACTCGCA
GAAGATCTGTCAGCACAAATGAGTCAAGGACCGTTAGCTTCATCTCCACAAATAAGAGAA
TTAGCGCAAATATTTACACACGCACTCTCCGCTTATCTACAGGATCCAGTAAAATTTAGA
AAAGTTTTATCAGACATTAGACCAACCCATCCATCTTTTTCTGATATGTTAGTTGATACA
GACGCTTCATTTAATACAGAATCTACTACTACAGTCAACGAAGAAGACGACGAAATACTT
GGATTTTCGGATGATCATAAAATCAGAGCAATAGAAAATTCCTTACGCAGTGGGAAATCA
ATAAATATCGCCACTGATTATCCAACTACTATTGAAGAAGTAACTACAACAGTTCAACCA
ACAACTGAAATTGAAACCACTACGACACCAAGAAGTCCCTTTAGATGTTGCGGAAGAATA
TCGGCTTCTTACACAACTGCTCCAACGCCCAGCAAACACTACTTTACTTCCATTCCATCT
AATACCTTTGCAGCGGGGAAAATAAATTCATTAACTAATTATAATACTGAGACTCCTAAA
AGTGAATATATCAATACAAAATTGTCAAACGGATATTTCATCAACTCCAATATAAAACAA
CTTCCCGTAACTGATTCTCAATTTTCCAACGATTACACTGAAACTACTACCTTGACAACA
GAATCAGATATCGACATTTTTGATTACACTCTTTCTCCGATAACTAATTCACATCAGTTG
TTTGAAAGTAAGAAAATAAAGACGACAACAAGTACACCGGAATCTACCCCTAAAAACTTC
GCCGAGACTGACAGTATTGAACTAGAAAATGAAGAAGAACTCCAAAGAGCACACAGTCAG
TCTTTTGTTACGCCTCAAGCAAATAGTGTCCGTAAAGGCAAGCAAATAAATCAATTTGTG
AACAAAGAATTAAAGAAACCTGCTGAGGATTTAGAAGCACCGACTCAAGCATCAATAGAT
TTAACGACACTTGCACCAACTACTACCCAAGCCACTGCTTCAACTCTTTCAGACCAAACT
TCGACTTTAACCACCGTGAATCCTTCACAAACTAGTATATTTACTTCTCCAGATAGTGAA
AAAAATAATAACGATTTCCAATGGCCAACCACTTTTGGTAATTGGCAAAGCACAATCATA
GATCCCATCACCCTTAACGATGGCTTAAGTTCTACTGGACCCGAGCAAGTAGTATCTGAA
ATATCTCAACAAACTAACGAATGGCCATTAGAGGCTGCGACGACTCAATCTACGTTCATA
ACAACCAATGAACCCGTCTCTACGACAACTGTTAATGTAGAAATAACAACAAACATCAAA
AATTATGAAAGATTTGGTAGACTTCTTTCTGACCCTTCATCGACTGAAGCCTCTCAAGAT
ATATCAACTGTTACAGACACTATCGTCGAAAAAGCAAAGCAAATAATGGGAGGAATGAAT
TCAACAACGACGCAAAAACTCATGAACGTCATGAAAAAAACGAAATCAAAGACAGTCAAA
CGTTTAATTCTCCTTTTAGTGCAAACGTGTGACGACGATCACAATTCGACAGCGGAAGCT
TCAAAGAAAGCATTGCTAGAAGCTCTGATGGCCGTCTCGCAGAAAGATATGGACGAAATA
GAAAAAGAAGAAGAATCAATAGAAACACATTCGGCAGAGTCTTTACCTGATGGGAAAACA
AAGGAATTCGAACGCCGAATGGACAGGATTCAAGTGGAACCTAGACAGAATAAAAATATA
AACACAGAGGCCGAGGAAGTCAACTCCTTATCAACTCCCACCACAACTGAGAGTTTTAAG
ACCGAAGAGACACAAACCACACCAGTCACAACAGCTAGAACTACACGAACGAGTCGAAGA
GGAAGCAGAAAATATTCGTTTTCTACAGAATCAGAACAAACACATACCACGGCGGGAGAC
CGACCGCTCGCCGAGGCGAGGACAGCTCCGCGGCCCGAAGTCAAAACACAATCAGACACG
AGGGCTTTGGAACTATTGAGATCATTGTACACCATCGCCGCGAGGTGGGGCAAATAG
Protein sequence:
MRWKEGLDIKMISLKTICVLVALNLVQTCHCARQLANRRKDTSSLYLPEPSAQSLTAIAQ
AMGAAGFEDYTEGKTLVKRLITADDQSELDVVEHMGVIGKAGVDFPALPNIPKTGFNCKN
VPTGYYADLETDCQVFHICDTSRKISFLCPNGTIFSQSHLICDWWFKVDCASAPALYEAS
VEYYSNEQKKSQKVGRTLSKNSNNRNVGADSQVRTESRKAPIPSTTEKLLRQSQNSQTNE
PVPTDVPTTRNYQTIFDINPTYATTEFENRKKNLVQLISNDFSNYPSKTTLPVYDSTTRK
TTEPVYDHNSLREMQVAAETASFAQNQNRQFLQEYNSKNLRPYPVYNHNLQVKPSKTKTL
TTLYDITATNAPQYTQQATTKRQTLLPYTKSYTINDNRDPYTRPGVSLLREFLEKERNKT
LLATTEKIATIRSDKQKSKINPEKKGETDNRSSFESTSKIPYTSKTVGQTETILNVEHST
EPTTEISYKDRRERLLRKIALDRKDAETTPPTVVTEKYYGNQSNRPGLVVPPSLTPKTLH
SLAIYYATALDNFATTPTPEDTETTTYSMDMYEKVTEGLPPLFSKQTITKYGNLFGLGTG
NDEMLENIKIDPNSSINELAEDLSAQMSQGPLASSPQIRELAQIFTHALSAYLQDPVKFR
KVLSDIRPTHPSFSDMLVDTDASFNTESTTTVNEEDDEILGFSDDHKIRAIENSLRSGKS
INIATDYPTTIEEVTTTVQPTTEIETTTTPRSPFRCCGRISASYTTAPTPSKHYFTSIPS
NTFAAGKINSLTNYNTETPKSEYINTKLSNGYFINSNIKQLPVTDSQFSNDYTETTTLTT
ESDIDIFDYTLSPITNSHQLFESKKIKTTTSTPESTPKNFAETDSIELENEEELQRAHSQ
SFVTPQANSVRKGKQINQFVNKELKKPAEDLEAPTQASIDLTTLAPTTTQATASTLSDQT
STLTTVNPSQTSIFTSPDSEKNNNDFQWPTTFGNWQSTIIDPITLNDGLSSTGPEQVVSE
ISQQTNEWPLEAATTQSTFITTNEPVSTTTVNVEITTNIKNYERFGRLLSDPSSTEASQD
ISTVTDTIVEKAKQIMGGMNSTTTQKLMNVMKKTKSKTVKRLILLLVQTCDDDHNSTAEA
SKKALLEALMAVSQKDMDEIEKEEESIETHSAESLPDGKTKEFERRMDRIQVEPRQNKNI
NTEAEEVNSLSTPTTTESFKTEETQTTPVTTARTTRTSRRGSRKYSFSTESEQTHTTAGD
RPLAEARTAPRPEVKTQSDTRALELLRSLYTIAARWGK