| New model in OGS2.0 | DPOGS212463 |
|---|---|
| Genomic Position | scaffold5422:- 4546-6897 |
| See gene structure | |
| CDS Length | 732 |
| Paired RNAseq reads | 450 |
| Single RNAseq reads | 1236 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009805 (3e-85) |
| Best Drosophila hit | brahma associated protein 55kD (1e-57) |
| Best Human hit | actin-like protein 6A isoform 1 (3e-46) |
| Best NR hit (blastp) | actin [Aedes aegypti] (6e-77) |
| Best NR hit (blastx) | actin [Aedes aegypti] (1e-63) |
| GeneOntology terms | GO:0035060 brahma complex GO:0003713 transcription coactivator activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0007010 cytoskeleton organization GO:0005884 actin filament GO:0005200 structural constituent of cytoskeleton GO:0005515 protein binding GO:0000910 cytokinesis GO:0048813 dendrite morphogenesis GO:0007517 muscle organ development |
| InterPro families | IPR004000 Actin-like |
| Orthology group | ND |
Nucleotide sequence:
ATGATAGAACATTTCGCTTGCGCGAGATACGCGTTAACAAGTGCCGCAGCCCGCTCACCC
CTCGGCGGCGATCACTTAGCATCCCAAGCTAAACTGCTGCTGGCAAACATGCACATCCAC
ATGCTGCCCTTATACAGCATACAGAGCAAAGAAGTCATACGTGAGAGAGAGAGAGCGAGA
TACACACCTCGCGTTCTACCAGCAGGTCTAACTTCCAGCTGGCAGCAGTACATGCTAAAA
CGGCAGTATGAGGACTTCGTTCACACAGTGGCTCAAGTGTCTGAAATGGTGTACGACGAA
CGGACAGCTGCTTCCGTTCCAGGTGTTCATTACGAATTTCCAGGTGGTTATCACCAGGAC
TTCGGACCGGAGAGGTTCAAACTGACGGAATGCCTGTTTGAACAGACTTTGGGAGCGCCA
CATCTGGTTTGCGCGGCGGCGTCGGCCTGCGACGCGGACGCTCGCTCGGCTCTCTGGGGC
GCGGTGGTCGCGTGCGGCGGGGTGGCGTGCACCGGCGGCTGGATGGAGAGGCTCGGCAAG
GAGCTGGCGGCCAGGGCGCCCTCCTCACACAGGCTCAAGACCAGCGCCCCGCCCGCGCAC
AGCGAGCGACGATTCGCCGCCTGGATCGGTGGGTCGATCCTAGCGTCTATCGGCTCGTTC
CAGCAGATGTGGATCTCGTCCCAGGAGTACGACGAGGGCGGCAAGGGTCAGCTCGAAAGG
AAATGCCCTTAG
Protein sequence:
MIEHFACARYALTSAAARSPLGGDHLASQAKLLLANMHIHMLPLYSIQSKEVIRERERAR
YTPRVLPAGLTSSWQQYMLKRQYEDFVHTVAQVSEMVYDERTAASVPGVHYEFPGGYHQD
FGPERFKLTECLFEQTLGAPHLVCAAASACDADARSALWGAVVACGGVACTGGWMERLGK
ELAARAPSSHRLKTSAPPAHSERRFAAWIGGSILASIGSFQQMWISSQEYDEGGKGQLER
KCP