| New model in OGS2.0 | DPOGS200573 |
|---|---|
| Genomic Position | scaffold4485:+ 351-9375 |
| See gene structure | |
| CDS Length | 2439 |
| Paired RNAseq reads | 1560 |
| Single RNAseq reads | 3839 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009362 (2e-33) |
| Best Drosophila hit | pod1, isoform F (4e-149) |
| Best Human hit | coronin-7 (3e-73) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008045 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | GG19612 [Drosophila erecta] (2e-162) |
| GeneOntology terms | GO:0003779 actin binding |
| InterPro families | IPR019775 WD40 repeat, conserved site IPR015049 Domain of unknown function DUF1900 IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR015505 Coronin |
| Orthology group | MCL12807 |
Nucleotide sequence:
ATGGTGTTATTCCACCAGAGTTACCGGGACTACCATGCTGATTTGTATCCTGATACGACG
GGTTGTGTCACATACCTGAGTGCTCCGATGTGGCTACAGGGCAGTGATTACCCCGTGCCA
AACATCTCTCTCAGACCCGACCACGACAACTGCAGTCAGATACACCGCGGCAATCTCGAA
GAATTGGTGAAAGTGATCCTATCGATGCCAGCGCCGAAGAACGGCGAGGCGAAGCCTGTC
GTCCAGAACAGAGAGAACGAGGAATCTGTGAAGGTCATACTCACACCGGAACACAGAGAC
GAAGACAGAATAGACTTCGTTAACGTCAAGGACATGATAAAGGGTATGGAGAAACAGAAG
GAAACGAACGGCTACCTCAAGAAGGCAACCGACAACGACCACGACGAACAGAAGAATAGT
GAAGGACGGTCGCTGGAGAAGAACGAGAGCTCGGACTCGTCGGAGTCGCTGTCCAGGAGC
AATAGTTTGATCAATGGCGTTCCAGCCCAGGTGCCGAAGCCGCTACCCAGGTCGTCCATA
TCCGAAGGCAGCTCCACCGACGAACAGGAAGCGCCCAAACCGAAACCCAGAACGTCGACC
ATACCCGGCGCCGGCTATAAGCCACGCCTCGGGCCGAAGCCGTTTTCAGCGGCAACTGGT
AACGAGGAATTTTCCTTCGACAAAGTTTTCTCTGTTCCACTAGTCCCCGGTGTGTCGAGG
TCCGACTCAGGACAATCACCAGGTACACCAGTGGCGCCTGTACCGTCAGTCAAGGACGAT
GACAAAGAAAAGTCACTCTCCCCTACTAGTGACGCCGAACTCACTAAAGAAGAATATACC
AATGGCAAATCGGACACGAGTGTCGAAGAGGAGGTCAGCTACAGACCCAAAACGCCCAGC
ACCGCCGAAAGACGGAAGATGTTTGAAAATACTGACAGGTCGATGTCTGTGCCGGCGCCG
GCGTCGCCAGCTCCTCTGAGACGCCGAGATTCTGTTAAATCCCGAAAGAGCCCCGAACGA
GAAGAGAAACGATCATCCGTTCCTAACGTCACCACTAAGAGAACGTCCACTGTATTTGGC
AAGGTGTCAAAATTCCGTCACCTGAAAGGCACTCCAGCACACAAGTCGACGCACGTGGAG
AACATTAAGAACATAAGTCGACAGATATCTGGAGAGTGCAACGGGTTCTATGCAAACGGC
GTGCGCTGCGCCGTGCCCCTGTCTGGTGGCAGCGGCCGCCTGGGGGTGGTGGAGCTCCCT
TGTGGCGCGACTCGCCTGAGTGCGGTGCCGTGCGGCCAGTCTGCGCTGACCCCCGCCGCC
GGAGGTCCACCGGCCTTGCTACACGCGGCGCCGCTACAGGACTGGGCCTTCGACCCCTTC
AATGACCGTCGGCTTCTGGTGGCCTGCGACGACGGAATGGTCCGCGAGTGGATCCTCCCC
GAAGGAGGTCTCCAAGAGTCTACGAACGAGCCTAACCGCACGTTCTCCGCTCACCCCGAT
AAGATATACATTATTAGATTCCATCCGACCGCTTCCGACGTGCTCACCACGGCCGCCCAC
GACCAGACTATCAAGATCTGGGACCTCAGCCAGGATGTACCGACGGCCGAGATCACGCTA
ACCGGTCACACCGATCAAATATTCGCATTGGACTGGTCGCCGTGCGGGGAGTATCTCGCT
ACACTCTGCAAGGATGGCTTTATACGGATCTACTCGCCTCGCTCTAAGACTGCTCCTCTC
CGCTCCGGCCCCGGGCCGAGTTCTCGCGGCGGTCGCCTCGTGTGGGCGCTCGGAGCCACT
CACCTCGTAGTCACCGGCTTCGACAAAGTATCGGAGCGTCAAATAATGCTGTACAAGGCC
AGCGACCTGTCTTCGCCTGTATGCACCGTGGGCTTGGACGTATCGCCGGCCATACTACAG
ACATACATCGACCACGACTCGAACACATTGTTTCTGACGGGACGAGGTGATTCTACTATA
TACTGTTACGAGGTGACATGTGAATCTCCGTACATCTGCGCGCTCTCTCATCACCGCGCC
GCCTCTCTTCATCAAGGGATCTGTTTCCTTCCTAAGAACCTGGTCGCTGTAGAGAAGGTG
GAATTCGCACGAGCGCTGCGACTGACTAATGGAACGATCGAGCCTTTGTCCTTCACTGTG
CCCAGAATAAAGAGCGAGCTGTTCCAAGACGATCTTTTCCCTCCCACGCTGGTGACGTGG
CAGCCCTGGCAGAGTTGCCGCGACTGGTTCGCTAACAAGCATGTGGCAGCCCTAACAGCC
AGTCTGCAACCGCCCGGAATGGAGCCATTGTCGGCCTACTCCGCGCCCGCTAAGGAGAAG
CCGAAACCCAAGCCCGACCTTATAAAATCTCACGTCCCCATGGACCCCAAAGACAAGCAG
GATAGTGTGAGTATATATATATTAGTTGGTTTTAAATAG
Protein sequence:
MVLFHQSYRDYHADLYPDTTGCVTYLSAPMWLQGSDYPVPNISLRPDHDNCSQIHRGNLE
ELVKVILSMPAPKNGEAKPVVQNRENEESVKVILTPEHRDEDRIDFVNVKDMIKGMEKQK
ETNGYLKKATDNDHDEQKNSEGRSLEKNESSDSSESLSRSNSLINGVPAQVPKPLPRSSI
SEGSSTDEQEAPKPKPRTSTIPGAGYKPRLGPKPFSAATGNEEFSFDKVFSVPLVPGVSR
SDSGQSPGTPVAPVPSVKDDDKEKSLSPTSDAELTKEEYTNGKSDTSVEEEVSYRPKTPS
TAERRKMFENTDRSMSVPAPASPAPLRRRDSVKSRKSPEREEKRSSVPNVTTKRTSTVFG
KVSKFRHLKGTPAHKSTHVENIKNISRQISGECNGFYANGVRCAVPLSGGSGRLGVVELP
CGATRLSAVPCGQSALTPAAGGPPALLHAAPLQDWAFDPFNDRRLLVACDDGMVREWILP
EGGLQESTNEPNRTFSAHPDKIYIIRFHPTASDVLTTAAHDQTIKIWDLSQDVPTAEITL
TGHTDQIFALDWSPCGEYLATLCKDGFIRIYSPRSKTAPLRSGPGPSSRGGRLVWALGAT
HLVVTGFDKVSERQIMLYKASDLSSPVCTVGLDVSPAILQTYIDHDSNTLFLTGRGDSTI
YCYEVTCESPYICALSHHRAASLHQGICFLPKNLVAVEKVEFARALRLTNGTIEPLSFTV
PRIKSELFQDDLFPPTLVTWQPWQSCRDWFANKHVAALTASLQPPGMEPLSAYSAPAKEK
PKPKPDLIKSHVPMDPKDKQDSVSIYILVGFK